RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 FAM102AQ5T9C2 384 aaPredicted RBP9.98□□□□□ -0.81
YBX3-215ENST00000544504 C11orf63Q6NUN7 778 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 SYCE2Q6PIF2 218 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 CCDC149Q6ZUS6 474 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 CCDC105Q8IYK2 499 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 TCEAL8Q8IYN2 117 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 KIAA2013Q8IYS2 634 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 NUP93Q8N1F7 819 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 ARHGAP18Q8N392 663 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 MRPL43Q8N983 215 aaKnown RBP9.98□□□□□ -0.81
YBX3-215ENST00000544504 TPCN2Q8NHX9 752 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 FNIP1Q8TF40 1166 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 ARHGEF26Q96DR7 871 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 TCF25Q9BQ70 676 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 LPIN3Q9BQK8 851 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 CLSTN3Q9BQT9 956 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 DLL3Q9NYJ7 618 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 RRN3Q9NYV6 651 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 CYTH4Q9UIA0 394 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 WDR27A2RRH5 827 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 CTAGE9A4FU28 777 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 TMEM191CA6NGB0 347 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 C2CD4DB7Z1M9 353 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 GOLGA8SH3BPF8 625 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 PRRG1O14668 218 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 TEX28O15482 410 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 HSF2BPO75031 334 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 MOCS3O95396 460 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 ZBED1O96006 694 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 CSH1P0DML2 217 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 CSH2P0DML3 217 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 LCP1P13796 627 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 CYP2F1P24903 491 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 KLRC2P26717 231 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 PSEN1P49768 467 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 TKTL1P51854 596 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 ADCY1Q08828 1119 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 ADIGQ0VDE8 80 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 PIGHQ14442 188 aaPredicted RBP9.97□□□□□ -0.81
YBX3-215ENST00000544504 TAF12Q16514 161 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 CYP4A22Q5TCH4 519 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 CWF19L1Q69YN2 538 aaKnown RBP9.97□□□□□ -0.81
YBX3-215ENST00000544504 PM20D1Q6GTS8 502 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 CES5AQ6NT32 575 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 OLFML1Q6UWY5 402 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 RSPO2Q6UXX9 243 aaPredicted RBP9.97□□□□□ -0.81
YBX3-215ENST00000544504 RNF19BQ6ZMZ0 732 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 DENND5BQ6ZUT9 1274 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 FAM183BPQ6ZVS7 135 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 BEND5Q7L4P6 421 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 SLC26A9Q7LBE3 791 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 DAAM2Q86T65 1068 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 C17orf53Q8N3J3 647 aaPredicted RBP9.97□□□□□ -0.81
YBX3-215ENST00000544504 ATAD1Q8NBU5 361 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 ZMIZ2Q8NF64 920 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 FLCNQ8NFG4 579 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 KIF18AQ8NI77 898 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 HDAC7Q8WUI4 952 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 C16orf45Q96MC5 204 aaPredicted RBP9.97□□□□□ -0.81
YBX3-215ENST00000544504 PGLYRP2Q96PD5 576 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 APOL5Q9BWW9 433 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 SMOC2Q9H3U7 446 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 TRIM10Q9UDY6 481 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 ANAPC7Q9UJX3 599 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 JRKLQ9Y4A0 524 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 ASB3Q9Y575 518 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 PAXBP1Q9Y5B6 917 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 DUSP10Q9Y6W6 482 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 MYH10P35580 1976 aa9.97□□□□□ -0.81
YBX3-215ENST00000544504 PTPRDP23468 1912 aa9.96□□□□□ -0.81
YBX3-215ENST00000544504 TCRBV5S1A1TA0A578 114 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 C2orf71A6NGG8 1288 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 MIF4GDA9UHW6 222 aaKnown RBP9.96□□□□□ -0.82
YBX3-215ENST00000544504 HHLA1C9JL84 531 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 TULP2O00295 520 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 FSCN2O14926 492 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 PAPSS1O43252 624 aaPredicted RBP9.96□□□□□ -0.82
YBX3-215ENST00000544504 ATMINO43313 823 aaPredicted RBP9.96□□□□□ -0.82
YBX3-215ENST00000544504 BUB1O43683 1085 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 RNF8O76064 485 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 BEST1O76090 585 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 PROSCO94903 275 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 GLUD1P00367 558 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 CNPP09543 421 aaKnown RBP9.96□□□□□ -0.82
YBX3-215ENST00000544504 TNNT1P13805 278 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 RPL17P18621 184 aaKnown RBP9.96□□□□□ -0.82
YBX3-215ENST00000544504 CASQ1P31415 396 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 SDC4P31431 198 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 MAN1A1P33908 653 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 SLC5A3P53794 718 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 DAOAP59103 153 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 ERVFC1P60507 584 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 YWHAZP63104 245 aaKnown RBP9.96□□□□□ -0.82
YBX3-215ENST00000544504 ITIH3Q06033 890 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 DUSP4Q13115 394 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 TUBB2AQ13885 445 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 CCDC142Q17RM4 750 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 DNTTIP2Q5QJE6 756 aaKnown RBP9.96□□□□□ -0.82
YBX3-215ENST00000544504 PPP1R15BQ5SWA1 713 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms