RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 DCXO43602 365 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 FDX1P10109 184 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 VCLP18206 1134 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 PSMC5P62195 406 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 TSPY1Q01534 308 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 PTK6Q13882 451 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 ADRM1Q16186 407 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 SPDYAQ5MJ70 313 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 DARS2Q6PI48 645 aaKnown RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 SNX31Q8N9S9 440 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 GABPB2Q8TAK5 448 aaPredicted RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 LMO3Q8TAP4 145 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 ACTL9Q8TC94 416 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 CD101Q93033 1021 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 LRGUKQ96M69 825 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 THEGQ9P2T0 379 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 PI4KBQ9UBF8 816 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 TTLL13PA6NNM8 815 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 H3BSA7 217 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 PEX10O60683 326 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 MT-CO1P00395 513 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 CYP1A2P05177 515 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 UQCRBP14927 111 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 MYH11P35749 1972 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 ACADVLP49748 655 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 OASLQ15646 514 aaKnown RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 ACAD10Q6JQN1 1059 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 TMEM214Q6NUQ4 689 aaKnown RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 LAYNQ6UX15 382 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 KCTD17Q8N5Z5 321 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 C12orf50Q8NA57 414 aaPredicted RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 E2F7Q96AV8 911 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 VPS50Q96JG6 964 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 PRICKLE1Q96MT3 831 aaPredicted RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 WDR18Q9BV38 432 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 NXF1Q9UBU9 619 aaKnown RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 TELO2Q9Y4R8 837 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 GPC6Q9Y625 555 aaPredicted RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 ADGRA3Q8IWK6 1321 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 SH3PXD2BA1X283 911 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 TESPA1A2RU30 521 aaPredicted RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 KBTBD13C9JR72 458 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 CSE1LP55060 971 aaKnown RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 CEP55Q53EZ4 464 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 NPNTQ6UXI9 565 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 FAM71AQ8IYT1 594 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 FAF2Q96CS3 445 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 PRMT6Q96LA8 375 aaPredicted RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 ZNF277Q9NRM2 450 aaPredicted RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 ITM2BQ9Y287 266 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 DTNAQ9Y4J8 743 aa13.29□□□□□ -0.28
PDZD4-209ENST00000544474 MRPL42Q9Y6G3 142 aaKnown RBP13.29□□□□□ -0.28
PDZD4-209ENST00000544474 C15orf38-AP3S2A0A0A6YYH1 394 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 DENND3A2RUS2 1198 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 KRT19P08727 400 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 OTUD4Q01804 1114 aaKnown RBP13.28□□□□□ -0.28
PDZD4-209ENST00000544474 FOLH1Q04609 750 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 SPIDRQ14159 915 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 VPS72Q15906 364 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 NADK2Q4G0N4 442 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 KRT39Q6A163 491 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 CES3Q6UWW8 571 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 ARPINQ7Z6K5 226 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 SLC9A9Q8IVB4 645 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 PGLYRP2Q96PD5 576 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 CEP41Q9BYV8 373 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 COA1Q9GZY4 146 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 NRDE2Q9H7Z3 1164 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 RAB6BQ9NRW1 208 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 DMTF1Q9Y222 760 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 DNAJC16Q9Y2G8 782 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 PSMD10O75832 226 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 PGGT1BP53609 377 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 CARTPTQ16568 116 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 PACS1Q6VY07 963 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 TMEM179Q6ZVK1 233 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 ANO5Q75V66 913 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 SV2AQ7L0J3 742 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 ZFP28Q8NHY6 868 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 CRYGNQ8WXF5 182 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 TMA16Q96EY4 203 aaKnown RBP13.28□□□□□ -0.28
PDZD4-209ENST00000544474 HEPHQ9BQS7 1158 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 VPS11Q9H270 941 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 PLGRKTQ9HBL7 147 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 MTO1Q9Y2Z2 717 aaKnown RBP13.28□□□□□ -0.28
PDZD4-209ENST00000544474 LAMA3Q16787 3333 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 MAST2Q6P0Q8 1798 aa13.28□□□□□ -0.28
PDZD4-209ENST00000544474 DDX60LQ5H9U9 1706 aaKnown RBP13.28□□□□□ -0.28
PDZD4-209ENST00000544474 SYNJ2BP-COX16A0A087WUM0 186 aa13.27□□□□□ -0.28
PDZD4-209ENST00000544474 MTA2O94776 668 aa13.27□□□□□ -0.28
PDZD4-209ENST00000544474 SRGAP2CP0DJJ0 459 aa13.27□□□□□ -0.28
PDZD4-209ENST00000544474 SRGAP2BP0DMP2 458 aa13.27□□□□□ -0.28
PDZD4-209ENST00000544474 EIF2AK2P19525 551 aaKnown RBP13.27□□□□□ -0.28
PDZD4-209ENST00000544474 RHBDF2Q6PJF5 856 aa13.27□□□□□ -0.28
PDZD4-209ENST00000544474 GET4Q7L5D6 327 aaPredicted RBP13.27□□□□□ -0.28
PDZD4-209ENST00000544474 USP37Q86T82 979 aa13.27□□□□□ -0.28
PDZD4-209ENST00000544474 COX4I2Q96KJ9 171 aa13.27□□□□□ -0.28
PDZD4-209ENST00000544474 KCND2Q9NZV8 630 aa13.27□□□□□ -0.28
PDZD4-209ENST00000544474 COX16Q9P0S2 106 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms