RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 MCF2P10911 925 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 SDC4P31431 198 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 ZNF143P52747 638 aaPredicted RBP16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 NME3Q13232 169 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 PLEKHG4Q58EX7 1191 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 CASC4Q6P4E1 433 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 CDHR3Q6ZTQ4 885 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 PQLC3Q8N755 202 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 ATXN7L3BQ96GX2 97 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 LGMNQ99538 433 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 SYT17Q9BSW7 474 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 KDM4CQ9H3R0 1056 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 MROH8Q9H579 483 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 ASB14A6NK59 587 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 I3L4J1 428 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 APOC4-APOC2K7ER74 178 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 TREHO43280 583 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 APOC2P02655 101 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 IFRD2Q12894 506 aaPredicted RBP16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 ZNF268Q14587 947 aaPredicted RBP16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 FASTKD5Q7L8L6 764 aaKnown RBP16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 ARMC9Q7Z3E5 817 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 CMASQ8NFW8 434 aaPredicted RBP16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 KHSRPQ92945 711 aaKnown RBP eCLIP16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 CNPY3Q9BT09 278 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 LHX5Q9H2C1 402 aa16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 ACTR5Q9H9F9 607 aaPredicted RBP16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 PSMC3IPQ9P2W1 217 aaPredicted RBP16.42■□□□□ 0.22
SNRNP70-203ENST00000544278 CREB3O43889 395 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 USP12O75317 370 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 BEST1O76090 585 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 HDAC4P56524 1084 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 GEMIN4P57678 1058 aaKnown RBP16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 PTK7Q13308 1070 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 MICAL1Q8TDZ2 1067 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 MAGEB18Q96M61 343 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 PCDH18Q9HCL0 1135 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 LGALS13Q9UHV8 139 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 DRG1Q9Y295 367 aaKnown RBP16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 ARL2BPQ9Y2Y0 163 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 ANK1P16157 1881 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 NUP205Q92621 2012 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 H0Y3Z8 333 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 CYP2C9P11712 490 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 TKTP29401 623 aaKnown RBP16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 DPY19L2Q6NUT2 758 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 OTOAQ7RTW8 1153 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 GPR142Q7Z601 462 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 ATP11CQ8NB49 1132 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 STAMBPL1Q96FJ0 436 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 RNF157Q96PX1 679 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 PRDM16Q9HAZ2 1276 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 SHOC2Q9UQ13 582 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 CHKBQ9Y259 395 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 MMP3P08254 477 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 GOT1P17174 413 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 CYP2B6P20813 491 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 BGNP21810 368 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 CPA2P48052 419 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 ZNF792Q3KQV3 632 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 MROH9Q5TGP6 573 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 ZCCHC23Q6ZST2 131 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 DENND5BQ6ZUT9 1274 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 CROCCP2Q86T23 111 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 NIPA2Q8N8Q9 360 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 RHOBTB2Q9BYZ6 727 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 NOD2Q9HC29 1040 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 FBXO6Q9NRD1 293 aaPredicted RBP16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 HESX1Q9UBX0 185 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 SNX10Q9Y5X0 201 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 RGPD3A6NKT7 1758 aaPredicted RBP16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 RGPD4Q7Z3J3 1758 aa16.41■□□□□ 0.22
SNRNP70-203ENST00000544278 PPP2R5DQ14738 602 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 ZNF484Q5JVG2 852 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 ARRDC4Q8NCT1 418 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 HASPINQ8TF76 798 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 AGAP3Q96P47 875 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 SMYD2Q9NRG4 433 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 SLC12A4Q9UP95 1085 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 IKBKGQ9Y6K9 419 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 OAS1P00973 400 aaKnown RBP16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 SESN2P58004 480 aaPredicted RBP16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 ITIH4Q14624 930 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 OLFML1Q6UWY5 402 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 ZNF75CPQ92670 426 aaPredicted RBP16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 LPPQ93052 612 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 PTPN18Q99952 460 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 PLCD4Q9BRC7 762 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 GBA2Q9HCG7 927 aaPredicted RBP16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 SLC5A4Q9NY91 659 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 SRRM3A6NNA2 597 aaPredicted RBP16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 TRIM49D1C9J1S8 452 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 GAS2O43903 313 aaKnown RBP16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 CYP2F1P24903 491 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 TAP1Q03518 808 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 ACVR2BQ13705 512 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 MTFR1Q15390 333 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 HFE2Q6ZVN8 426 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 STKLD1Q8NE28 680 aa16.4■□□□□ 0.22
SNRNP70-203ENST00000544278 MT-ND3P03897 115 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms