RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SCML4Q8N228 414 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 HAUS1Q96CS2 278 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 TMEM39AQ9NV64 488 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 FAN1Q9Y2M0 1017 aa20.69■□□□□ 0.9
COPS7A-218ENST00000543939 OR4Q2P0C623 313 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 USP17L7P0C7H9 530 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 IL4RP24394 825 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 IVDP26440 423 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 KRT81Q14533 505 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 SYPL2Q5VXT5 272 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 PM20D1Q6GTS8 502 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 CNKSR3Q6P9H4 555 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.68■□□□□ 0.9
COPS7A-218ENST00000543939 DCP1BQ8IZD4 617 aaKnown RBP20.68■□□□□ 0.9
COPS7A-218ENST00000543939 ACTL9Q8TC94 416 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 IRGQQ8WZA9 623 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 RNF157Q96PX1 679 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 FMO2Q99518 471 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 GPR62Q9BZJ7 368 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 FAM129AQ9BZQ8 928 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 WHRNQ9P202 907 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 STAP1Q9ULZ2 295 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 LTBP2Q14767 1821 aa20.68■□□□□ 0.9
COPS7A-218ENST00000543939 ZNF487B1APH4 448 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 GALTP07902 379 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 CLTBP09497 229 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 PLTPP55058 493 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 PITX1P78337 314 aaPredicted RBP20.67■□□□□ 0.9
COPS7A-218ENST00000543939 OTUD4Q01804 1114 aaKnown RBP20.67■□□□□ 0.9
COPS7A-218ENST00000543939 PKN2Q16513 984 aaKnown RBP20.67■□□□□ 0.9
COPS7A-218ENST00000543939 DPYSL2Q16555 572 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 SLC39A12Q504Y0 691 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 FAM171A1Q5VUB5 890 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 FBXO25Q8TCJ0 367 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 ART4Q93070 314 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 C11orf49Q9H6J7 331 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 ASIC3Q9UHC3 531 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 NAALADL1Q9UQQ1 740 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 USP3Q9Y6I4 520 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 APOC4-APOC2K7ER74 178 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 APOC2P02655 101 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 LTFP02788 710 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 ITGAVP06756 1048 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 FGFR3P22607 806 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 KLRC2P26717 231 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 RFC2P35250 354 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 GPS2Q13227 327 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 IKBKEQ14164 716 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 TFDP2Q14188 446 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 ALS2CLQ60I27 953 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 LRRC43Q8N309 656 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 ALLCQ8N6M5 410 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 CCDC185Q8N715 623 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 LRRC45Q96CN5 670 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 FAF2Q96CS3 445 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 PAWRQ96IZ0 340 aaKnown RBP20.67■□□□□ 0.9
COPS7A-218ENST00000543939 ZNF670Q9BS34 389 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 MAK16Q9BXY0 300 aaKnown RBP20.67■□□□□ 0.9
COPS7A-218ENST00000543939 SAE1Q9UBE0 346 aaPredicted RBP20.67■□□□□ 0.9
COPS7A-218ENST00000543939 ZNF148Q9UQR1 794 aa20.67■□□□□ 0.9
COPS7A-218ENST00000543939 SF3B1O75533 1304 aaKnown RBP eCLIP20.66■□□□□ 0.98e-6■■■■■ 107
COPS7A-218ENST00000543939 H3BQF6 201 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 AGPSO00116 658 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 CYP2F1P24903 491 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 L1CAMP32004 1257 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 TRIP13Q15645 432 aaPredicted RBP20.66■□□□□ 0.9
COPS7A-218ENST00000543939 LRRC26Q2I0M4 334 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 ANKRD20A8PQ5CZ79 823 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 FUT10Q6P4F1 479 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 ZNF365Q70YC5 407 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 TMC3Q7Z5M5 1100 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 CCDC89Q8N998 374 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 SNF8Q96H20 258 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 TXLNGYQ9BZA5 131 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 MTMR10Q9NXD2 777 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 AP4E1Q9UPM8 1137 aa20.66■□□□□ 0.9
COPS7A-218ENST00000543939 GOLGA6BA6NDN3 693 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 M0QYT0 321 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 TP73O15350 636 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 KRT14P02533 472 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 PECAM1P16284 738 aaPredicted RBP20.65■□□□□ 0.9
COPS7A-218ENST00000543939 ITIH2P19823 946 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 RDXP35241 583 aaKnown RBP20.65■□□□□ 0.9
COPS7A-218ENST00000543939 C1QTNF8P60827 252 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 CALCOCO2Q13137 446 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 NFE2Q16621 373 aaPredicted RBP20.65■□□□□ 0.9
COPS7A-218ENST00000543939 CTXN3Q4LDR2 81 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 GSTA5Q7RTV2 222 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 CEP57Q86XR8 500 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 PSTKQ8IV42 348 aaKnown RBP20.65■□□□□ 0.9
COPS7A-218ENST00000543939 IQCKQ8N0W5 287 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 PQLC3Q8N755 202 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 PIK3R5Q8WYR1 880 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 FUBP3Q96I24 572 aaKnown RBP eCLIP20.65■□□□□ 0.9
COPS7A-218ENST00000543939 DHX35Q9H5Z1 703 aaKnown RBP20.65■□□□□ 0.9
COPS7A-218ENST00000543939 FZD10Q9ULW2 581 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 COL4A6Q14031 1691 aa20.65■□□□□ 0.9
COPS7A-218ENST00000543939 OR6C75A6NL08 312 aa20.64■□□□□ 0.9
COPS7A-218ENST00000543939 TNFRSF10BO14763 440 aa20.64■□□□□ 0.9
COPS7A-218ENST00000543939 CAPN9O14815 690 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms