RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 E2F8A0AVK6 867 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 YJEFN3A6XGL0 299 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 E7ENQ6 273 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 GFPT2O94808 682 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 PBX1P40424 430 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 GOLGA8FQ08AF8 430 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 GOLGA8DPQ0D2H9 430 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 C10orf120Q5SQS8 335 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 BTBD8Q5XKL5 378 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 CACNA2D4Q7Z3S7 1137 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 NOP9Q86U38 636 aaKnown RBP19.28■□□□□ 0.68
COPS7A-216ENST00000543170 FBXL6Q8N531 539 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 WDTC1Q8N5D0 677 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 C1orf131Q8NDD1 294 aaKnown RBP19.28■□□□□ 0.68
COPS7A-216ENST00000543170 ATP2A3Q93084 1043 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 PBXIP1Q96AQ6 731 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 ZFYVE19Q96K21 471 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 LRFN3Q9BTN0 628 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 TRIM62Q9BVG3 475 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 KLF16Q9BXK1 252 aaPredicted RBP19.28■□□□□ 0.68
COPS7A-216ENST00000543170 TTYH3Q9C0H2 523 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 MFSD1Q9H3U5 465 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 C8orf33Q9H7E9 229 aaPredicted RBP19.28■□□□□ 0.68
COPS7A-216ENST00000543170 ST7Q9NRC1 585 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 HEBP1Q9NRV9 189 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 GKN1Q9NS71 199 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 ABCC13Q9NSE7 274 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 NOCTQ9UK39 431 aaKnown RBP19.28■□□□□ 0.68
COPS7A-216ENST00000543170 KMT2EQ8IZD2 1858 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 ZDBF2Q9HCK1 2354 aa19.28■□□□□ 0.68
COPS7A-216ENST00000543170 F5P12259 2224 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 E5RJQ4 531 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 SLC9A3R1O14745 358 aaPredicted RBP19.27■□□□□ 0.68
COPS7A-216ENST00000543170 TBX18O95935 607 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 IFNAR2P48551 515 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 SNX16P57768 344 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 ITPRIPL2Q3MIP1 535 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 IER5LQ5T953 404 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 BSPRYQ5W0U4 402 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 CWF19L1Q69YN2 538 aaKnown RBP19.27■□□□□ 0.68
COPS7A-216ENST00000543170 TPRG1Q6ZUI0 275 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 BEND5Q7L4P6 421 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 PASD1Q8IV76 773 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 TMEM35BQ8NCS4 154 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 BAP1Q92560 729 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 GOLGA1Q92805 767 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 OTUB2Q96DC9 234 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 IQCDQ96DY2 449 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 EDEM3Q9BZQ6 932 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 TBC1D17Q9HA65 648 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 HPS4Q9NQG7 708 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 DUS2Q9NX74 493 aaKnown RBP19.27■□□□□ 0.68
COPS7A-216ENST00000543170 CFAP97Q9P2B7 532 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 TBC1D14Q9P2M4 693 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 PIAS3Q9Y6X2 628 aa19.27■□□□□ 0.68
COPS7A-216ENST00000543170 ZNF318Q5VUA4 2279 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 MIA3Q5JRA6 1907 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 MAN2B1O00754 1011 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 PAPSS1O43252 624 aaPredicted RBP19.26■□□□□ 0.67
COPS7A-216ENST00000543170 PDGFBP01127 241 aaPredicted RBP19.26■□□□□ 0.67
COPS7A-216ENST00000543170 LTFP02788 710 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 TPM3P06753 285 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 CCDC172P0C7W6 258 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 CLCN5P51795 746 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 CDR2Q01850 454 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 RUNX3Q13761 415 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 EML3Q32P44 896 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 MSANTD2Q6P1R3 559 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 RSRC2Q7L4I2 434 aaKnown RBP19.26■□□□□ 0.67
COPS7A-216ENST00000543170 SUGP1Q8IWZ8 645 aaKnown RBP19.26■□□□□ 0.67
COPS7A-216ENST00000543170 IPO4Q8TEX9 1081 aaKnown RBP19.26■□□□□ 0.67
COPS7A-216ENST00000543170 CLEC4CQ8WTT0 213 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 NDRG1Q92597 394 aaKnown RBP19.26■□□□□ 0.67
COPS7A-216ENST00000543170 PPP1R13BQ96KQ4 1090 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 CPXM1Q96SM3 734 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 NUP58Q9BVL2 599 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 PDCL3Q9H2J4 239 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 STRIP2Q9ULQ0 834 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 SH3BP1Q9Y3L3 701 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 WNT6Q9Y6F9 365 aa19.26■□□□□ 0.67
COPS7A-216ENST00000543170 KANSL1LA0AUZ9 987 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 SHISA7A6NL88 538 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 PIK3R2O00459 728 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 NFATC1O95644 943 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 MMEP08473 750 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 FERP16591 822 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 COG7P83436 770 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 TNK2Q07912 1038 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 PTPN20Q4JDL3 420 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 TAF3Q5VWG9 929 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 TRIM68Q6AZZ1 485 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 ZNF852Q6ZMS4 543 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 TRIM72Q6ZMU5 477 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 HTR3DQ70Z44 454 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 RALGPS2Q86X27 583 aaPredicted RBP19.25■□□□□ 0.67
COPS7A-216ENST00000543170 ZDHHC17Q8IUH5 632 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 CPA6Q8N4T0 437 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 RNF139Q8WU17 664 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 OSBPL6Q9BZF3 934 aa19.25■□□□□ 0.67
COPS7A-216ENST00000543170 MIS12Q9H081 205 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms