RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 LPAR3Q9UBY5 353 aa4.73□□□□□ -1.65
MDM2-229ENST00000543046 CEP164Q9UPV0 1460 aa4.73□□□□□ -1.65
MDM2-229ENST00000543046 SMARCA2P51531 1590 aa4.73□□□□□ -1.65
MDM2-229ENST00000543046 ABCC9O60706 1549 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 MANSC4A6NHS7 340 aaPredicted RBP4.72□□□□□ -1.65
MDM2-229ENST00000543046 LINC01548A6NM66 108 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 SMIM22K7EJ46 135 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 EXOC3O60645 756 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 LETM1O95202 739 aaPredicted RBP4.72□□□□□ -1.65
MDM2-229ENST00000543046 NHLRC4P0CG21 123 aaPredicted RBP4.72□□□□□ -1.65
MDM2-229ENST00000543046 HARSP12081 509 aaKnown RBP4.72□□□□□ -1.65
MDM2-229ENST00000543046 CREB1P16220 341 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 RBL1P28749 1068 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 COPAP53621 1224 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 TFF2Q03403 129 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 PROSER3Q2NL68 480 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 ARL13BQ3SXY8 428 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 CRTC1Q6UUV9 634 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 SFTPA1Q8IWL2 248 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 CCDC146Q8IYE0 955 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 TXLNBQ8N3L3 684 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 OR2C3Q8N628 320 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 CCDC150Q8NCX0 1101 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 BRI3BPQ8WY22 251 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 TRIM44Q96DX7 344 aaPredicted RBP4.72□□□□□ -1.65
MDM2-229ENST00000543046 CCDC138Q96M89 665 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 SNX18Q96RF0 628 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 CIPCQ9C0C6 399 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 NKX1-2Q9UD57 310 aaPredicted RBP4.72□□□□□ -1.65
MDM2-229ENST00000543046 STEAP1Q9UHE8 339 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 SLC27A6Q9Y2P4 619 aa4.72□□□□□ -1.65
MDM2-229ENST00000543046 FNDC1Q4ZHG4 1894 aaPredicted RBP4.72□□□□□ -1.65
MDM2-229ENST00000543046 WIPF3A6NGB9 483 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 H7C1Q1 480 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 CLGNO14967 610 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 KCNQ3O43525 872 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 PLIN1O60240 522 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 FGF18O76093 207 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 PRKCGP05129 697 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 DIO1P49895 249 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 C21orf58P58505 322 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 LMAN2Q12907 356 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 CLCA4Q14CN2 919 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 PRAMEF17Q5VTA0 474 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 DENND2CQ68D51 928 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 USP17L6PQ6QN14 398 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 SEMA6DQ8NFY4 1073 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 MBD3L2Q8NHZ7 208 aaPredicted RBP4.71□□□□□ -1.66
MDM2-229ENST00000543046 TNIP3Q96KP6 325 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 MMS19Q96T76 1030 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 MYD88Q99836 296 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 POLR3GLQ9BT43 218 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 ZBTB26Q9HCK0 441 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 SNX15Q9NRS6 342 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 TFCP2L1Q9NZI6 479 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 FNIP2Q9P278 1114 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 MGAT4CQ9UBM8 478 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 MAN2B2Q9Y2E5 1009 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 RIPOR2Q9Y4F9 1068 aa4.71□□□□□ -1.66
MDM2-229ENST00000543046 PEG3Q9GZU2 1588 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 COL15A1P39059 1388 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 A8MVJ9 347 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 TMPRSS11DO60235 418 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 COQ9O75208 318 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 FRAT2O75474 233 aaPredicted RBP4.7□□□□□ -1.66
MDM2-229ENST00000543046 NDST3O95803 873 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 ARP10275 920 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 YY1P25490 414 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 GABRB3P28472 473 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 MCM5P33992 734 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 HTR7P34969 479 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 RENBPP51606 427 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 EIF4A1P60842 406 aaKnown RBP4.7□□□□□ -1.66
MDM2-229ENST00000543046 FHL3Q13643 280 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 ST3GAL2Q16842 350 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 SLC35G1Q2M3R5 365 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 FAXCQ5TGI0 409 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 IZUMO3Q5VZ72 239 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 KIAA0408Q6ZU52 694 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 BCDIN3DQ7Z5W3 292 aaKnown RBP4.7□□□□□ -1.66
MDM2-229ENST00000543046 SRLQ86TD4 932 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 CERS3Q8IU89 383 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 FSTL5Q8N475 847 aaPredicted RBP4.7□□□□□ -1.66
MDM2-229ENST00000543046 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 DPF1Q92782 380 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 SNX27Q96L92 541 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 ZNF830Q96NB3 372 aaPredicted RBP4.7□□□□□ -1.66
MDM2-229ENST00000543046 EIF2AQ9BY44 585 aaKnown RBP4.7□□□□□ -1.66
MDM2-229ENST00000543046 CHST12Q9NRB3 414 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 TMOD4Q9NZQ9 345 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 NUDCQ9Y266 331 aa4.7□□□□□ -1.66
MDM2-229ENST00000543046 RRBP1Q9P2E9 1410 aaKnown RBP4.7□□□□□ -1.66
MDM2-229ENST00000543046 TISP43B9A030 160 aa4.69□□□□□ -1.66
MDM2-229ENST00000543046 DYNC1I1O14576 645 aa4.69□□□□□ -1.66
MDM2-229ENST00000543046 CCNT2O60583 730 aaKnown RBP4.69□□□□□ -1.66
MDM2-229ENST00000543046 IDEP14735 1019 aa4.69□□□□□ -1.66
MDM2-229ENST00000543046 ZNF37AP17032 561 aaPredicted RBP4.69□□□□□ -1.66
MDM2-229ENST00000543046 PTMSP20962 102 aa4.69□□□□□ -1.66
MDM2-229ENST00000543046 MST1P26927 711 aa4.69□□□□□ -1.66
MDM2-229ENST00000543046 RIPK4P57078 832 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms