RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 SLITRK1Q96PX8 696 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 AP1M1Q9BXS5 423 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 RXFP1Q9HBX9 757 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 DDX56Q9NY93 547 aaKnown RBP13.86□□□□□ -0.19
CHFR-221ENST00000542714 FNIP2Q9P278 1114 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 SCML2Q9UQR0 700 aa13.86□□□□□ -0.19
CHFR-221ENST00000542714 FAM92AA1XBS5 289 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 FSCN2O14926 492 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 CTNNB1P35222 781 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 KRT17Q04695 432 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 LLGL1Q15334 1064 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 TAZQ16635 292 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 HADHQ16836 314 aaKnown RBP13.85□□□□□ -0.19
CHFR-221ENST00000542714 LONRF2Q1L5Z9 754 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 KCNT1Q5JUK3 1230 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 BSPRYQ5W0U4 402 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 TPGS2Q68CL5 300 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 SPOCD1Q6ZMY3 1216 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 STRADAQ7RTN6 431 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 RCOR2Q8IZ40 523 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 EDEM1Q92611 657 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 RNF25Q96BH1 459 aaPredicted RBP13.85□□□□□ -0.19
CHFR-221ENST00000542714 RBM41Q96IZ5 413 aaKnown RBP13.85□□□□□ -0.19
CHFR-221ENST00000542714 C17orf80Q9BSJ5 609 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 EPC1Q9H2F5 836 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 NMUR1Q9HB89 426 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 MRPL17Q9NRX2 175 aaKnown RBP13.85□□□□□ -0.19
CHFR-221ENST00000542714 GPATCH2LQ9NWQ4 482 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 OSER1Q9NX31 292 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 ANAPC1Q9H1A4 1944 aa13.85□□□□□ -0.19
CHFR-221ENST00000542714 MTCL1Q9Y4B5 1905 aaKnown RBP13.85□□□□□ -0.19
CHFR-221ENST00000542714 A0A1W2PQH9 124 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 SLC38A8A6NNN8 435 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 KRIT1O00522 736 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 TEX28O15482 410 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 PRPSAP2O60256 369 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 ZRANB2O95218 330 aaKnown RBP eCLIP13.84□□□□□ -0.19
CHFR-221ENST00000542714 KRT7P08729 469 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 CD48P09326 243 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 RALAP11233 206 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 DNAJB1P25685 340 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 PTPN7P35236 360 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 CDKN2BP42772 138 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 YWHAGP61981 247 aaKnown RBP eCLIP13.84□□□□□ -0.19
CHFR-221ENST00000542714 RPL10AP62906 217 aaKnown RBP13.84□□□□□ -0.19
CHFR-221ENST00000542714 MTMR3Q13615 1198 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 ELF2Q15723 593 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 CA9Q16790 459 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 BEND5Q7L4P6 421 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 ADAT2Q7Z6V5 191 aaKnown RBP13.84□□□□□ -0.19
CHFR-221ENST00000542714 CCDC50Q8IVM0 306 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 CCDC185Q8N715 623 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 CMASQ8NFW8 434 aaPredicted RBP13.84□□□□□ -0.19
CHFR-221ENST00000542714 ZNF461Q8TAF7 563 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 GIPC2Q8TF65 315 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 TEKT4Q8WW24 435 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 HSPH1Q92598 858 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 NCAPGQ9BPX3 1015 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 SNRNP25Q9BV90 132 aaKnown RBP13.84□□□□□ -0.19
CHFR-221ENST00000542714 TTLL2Q9BWV7 592 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.84□□□□□ -0.19
CHFR-221ENST00000542714 COMMD8Q9NX08 183 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 GMIPQ9P107 970 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 HSFX1Q9UBD0 423 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 STK39Q9UEW8 545 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 STAP1Q9ULZ2 295 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 LZTS1Q9Y250 596 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 YIPF1Q9Y548 306 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 DENND4CQ5VZ89 1909 aa13.84□□□□□ -0.19
CHFR-221ENST00000542714 hCG_1818297A0A087WSY0 165 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 LRRD1A4D1F6 860 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 M0QYT0 321 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 RTN3O95197 1032 aaPredicted RBP13.83□□□□□ -0.2
CHFR-221ENST00000542714 IGLV3-25P01717 112 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 CNPP09543 421 aaKnown RBP13.83□□□□□ -0.2
CHFR-221ENST00000542714 NCAM1P13591 858 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 ATF2P15336 505 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 KDELR1P24390 212 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 YWHAQP27348 245 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 RDXP35241 583 aaKnown RBP13.83□□□□□ -0.2
CHFR-221ENST00000542714 ERVFC1P60507 584 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 COPS2P61201 443 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 ADCY2Q08462 1091 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 KLF1Q13351 362 aaPredicted RBP13.83□□□□□ -0.2
CHFR-221ENST00000542714 PPP2R5EQ16537 467 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 ZC3H12AQ5D1E8 599 aaKnown RBP13.83□□□□□ -0.2
CHFR-221ENST00000542714 SCYL2Q6P3W7 929 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 DENND5BQ6ZUT9 1274 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 TAC4Q86UU9 113 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 FAM131BQ86XD5 332 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 PRELID2Q8N945 189 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 SLC7A14Q8TBB6 771 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 ADAM32Q8TC27 787 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 FAM71BQ8TC56 605 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 SPPL3Q8TCT6 385 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 DQX1Q8TE96 717 aaKnown RBP13.83□□□□□ -0.2
CHFR-221ENST00000542714 UBXN4Q92575 508 aa13.83□□□□□ -0.2
CHFR-221ENST00000542714 PGAP3Q96FM1 320 aaPredicted RBP13.83□□□□□ -0.2
CHFR-221ENST00000542714 NAP1L3Q99457 506 aaPredicted RBP13.83□□□□□ -0.2
CHFR-221ENST00000542714 PLVAPQ9BX97 442 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms