RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 WFS1O76024 890 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 SGPL1O95470 568 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 GH1P01241 217 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 ALDH2P05091 517 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 GJB1P08034 283 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 H2AFZP0C0S5 128 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 TMEM253P0C7T8 217 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 PRKACBP22694 351 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 DPYSQ14117 519 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 SCARA3Q6AZY7 606 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 H2AFVQ71UI9 128 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 VPS36Q86VN1 386 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 RASAL3Q86YV0 1011 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 TPCN2Q8NHX9 752 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 PRR7Q8TB68 274 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 DDX1Q92499 740 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 MSTO1Q9BUK6 570 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 MYLK2Q9H1R3 596 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 EPB41L4BQ9H329 900 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 SLITRK6Q9H5Y7 841 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 CTTNBP2NLQ9P2B4 639 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 ANKFY1Q9P2R3 1169 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 STXBP5LQ9Y2K9 1186 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 TMA7Q9Y2S6 64 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 LOC105371267A0A1B0GV96 52 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 SPTLC1O15269 473 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 KATNA1O75449 491 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 OAS1P00973 400 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 SMPD1P17405 629 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 STX2P32856 288 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 MFAP3P55082 362 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 GCNT1Q02742 428 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 SULT2A1Q06520 285 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 MAPRE1Q15691 268 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 MORN1Q5T089 497 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 NXNQ6DKJ4 435 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 NLRP9Q7RTR0 991 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 PLEKHH3Q7Z736 793 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 USP37Q86T82 979 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 SLC47A2Q86VL8 602 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 ECHDC2Q86YB7 292 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 RNF149Q8NC42 400 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 DTX3LQ8TDB6 740 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 BRSK1Q8TDC3 778 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 ARHGEF2Q92974 986 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 ARHGEF26Q96DR7 871 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 GIMAP5Q96F15 307 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 TRAPPC9Q96Q05 1148 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 CGRRF1Q99675 332 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 PI4K2AQ9BTU6 479 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 STMN4Q9H169 189 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 FZD8Q9H461 694 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 MINDY3Q9H8M7 445 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 VCX3AQ9NNX9 186 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 ACP6Q9NPH0 428 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 NMRK2Q9NPI5 230 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 PFDN4Q9NQP4 134 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 RBAKQ9NYW8 714 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 ERAP1Q9NZ08 941 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 HEY1Q9Y5J3 304 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 TOM1L1O75674 476 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 IQCF3P0C7M6 154 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 MAPK4P31152 587 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 TNFSF9P41273 254 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 CLCN3P51790 818 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 B2MP61769 119 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 AP2B1P63010 937 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 FMO1Q01740 532 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 MBTD1Q05BQ5 628 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 MGAT5Q09328 741 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 SP140Q13342 867 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 ZNF211Q13398 564 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 TCEAL1Q15170 157 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 TAF1CQ15572 869 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 PPM1KQ8N3J5 372 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 AFG1LQ8WV93 481 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 SKA1Q96BD8 255 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 NT5C1BQ96P26 610 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 NFKBIZQ9BYH8 718 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 PIF1Q9H611 641 aa8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 DENND2DQ9H6A0 471 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 APOBEC3GQ9HC16 384 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-221ENST00000542407 ANK1P16157 1881 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 A0A1W2PRQ8 180 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 SLC15A5A6NIM6 579 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 E7ENQ6 273 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 CYP26A1O43174 497 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 HNRNPRO43390 633 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 GJB6O95452 261 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 CBX6O95503 412 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 IGHA2P01877 340 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 HLA-DRAP01903 254 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 PRKCBP05771 671 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 ZNF286BP0CG31 522 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 SRGAP2CP0DJJ0 459 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 INSRRP14616 1297 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 CCNFP41002 786 aa8.3□□□□□ -1.08
PDLIM5-221ENST00000542407 ERFP50548 548 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms