RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 RHOBTB1O94844 696 aa16.48■□□□□ 0.23
VPS33A-206ENST00000542310 ZNF806P0C7X5 589 aa16.48■□□□□ 0.23
VPS33A-206ENST00000542310 ACO1P21399 889 aaKnown RBP16.48■□□□□ 0.23
VPS33A-206ENST00000542310 ATP5C1P36542 298 aaKnown RBP16.48■□□□□ 0.23
VPS33A-206ENST00000542310 KIR2DL1P43626 348 aaPredicted RBP16.48■□□□□ 0.23
VPS33A-206ENST00000542310 KIF11P52732 1056 aa16.48■□□□□ 0.23
VPS33A-206ENST00000542310 FKBP3Q00688 224 aaKnown RBP16.48■□□□□ 0.23
VPS33A-206ENST00000542310 CRY1Q16526 586 aa16.48■□□□□ 0.23
VPS33A-206ENST00000542310 C2orf27AQ580R0 203 aa16.48■□□□□ 0.23
VPS33A-206ENST00000542310 PLA2G2CQ5R387 149 aa16.48■□□□□ 0.23
VPS33A-206ENST00000542310 PPP1R26Q5T8A7 1209 aaPredicted RBP16.48■□□□□ 0.23
VPS33A-206ENST00000542310 ELOA2Q8IYF1 753 aaPredicted RBP16.48■□□□□ 0.23
VPS33A-206ENST00000542310 SEMA4DQ92854 862 aa16.48■□□□□ 0.23
VPS33A-206ENST00000542310 KLF16Q9BXK1 252 aaPredicted RBP16.48■□□□□ 0.23
VPS33A-206ENST00000542310 DUSP15Q9H1R2 295 aaPredicted RBP16.48■□□□□ 0.23
VPS33A-206ENST00000542310 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.48■□□□□ 0.23
VPS33A-206ENST00000542310 CISHQ9NSE2 258 aa16.48■□□□□ 0.23
VPS33A-206ENST00000542310 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.48■□□□□ 0.23
VPS33A-206ENST00000542310 MARK1Q9P0L2 795 aa16.48■□□□□ 0.23
VPS33A-206ENST00000542310 COQ4Q9Y3A0 265 aa16.48■□□□□ 0.23
VPS33A-206ENST00000542310 USP3Q9Y6I4 520 aa16.48■□□□□ 0.23
VPS33A-206ENST00000542310 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.47■□□□□ 0.23
VPS33A-206ENST00000542310 GREM1O60565 184 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 ALDH1A2O94788 518 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 IRF1P10914 325 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 MPLP40238 635 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 PPP1R2P41236 205 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 SLC6A11P48066 632 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 PGFP49763 221 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 KDSRQ06136 332 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 USP39Q53GS9 565 aaKnown RBP16.47■□□□□ 0.23
VPS33A-206ENST00000542310 EOGTQ5NDL2 527 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 ARHGAP17Q68EM7 881 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 NUDT18Q6ZVK8 323 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 TRMT11Q7Z4G4 463 aaKnown RBP16.47■□□□□ 0.23
VPS33A-206ENST00000542310 TERB1Q8NA31 727 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 C12orf50Q8NA57 414 aaPredicted RBP16.47■□□□□ 0.23
VPS33A-206ENST00000542310 IL17RCQ8NAC3 791 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 DDX1Q92499 740 aaKnown RBP16.47■□□□□ 0.23
VPS33A-206ENST00000542310 SMARCE1Q969G3 411 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 UBXN6Q9BZV1 441 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 ARRDC1-AS1Q9H2J1 176 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 OSER1Q9NX31 292 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 CLIC5Q9NZA1 410 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 DNMT3LQ9UJW3 386 aa16.47■□□□□ 0.23
VPS33A-206ENST00000542310 A0A1W2PQH9 124 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 CACNG3O60359 315 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 TULP3O75386 442 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 RARGP13631 454 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 MESP2Q0VG99 397 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 AASDHQ4L235 1098 aaPredicted RBP16.46■□□□□ 0.23
VPS33A-206ENST00000542310 DCAF17Q5H9S7 520 aaPredicted RBP16.46■□□□□ 0.23
VPS33A-206ENST00000542310 PMS2CLQ68D20 193 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 ANO7Q6IWH7 933 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 ALLCQ8N6M5 410 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 SLC4A11Q8NBS3 891 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 TXNDC5Q8NBS9 432 aaKnown RBP16.46■□□□□ 0.23
VPS33A-206ENST00000542310 MDGA1Q8NFP4 955 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 JAKMIP2Q96AA8 810 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 TMEM176AQ96HP8 235 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 NMUR1Q9HB89 426 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 POLMQ9NP87 494 aaPredicted RBP16.46■□□□□ 0.23
VPS33A-206ENST00000542310 VPS45Q9NRW7 570 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 DEC1Q9P2X7 70 aa16.46■□□□□ 0.23
VPS33A-206ENST00000542310 NCOR2Q9Y618 2525 aa16.46■□□□□ 0.22
VPS33A-206ENST00000542310 PSMA7O14818 248 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 KLF8O95600 359 aaPredicted RBP16.45■□□□□ 0.22
VPS33A-206ENST00000542310 RALAP11233 206 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 TIE1P35590 1138 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 PLA2G4AP47712 749 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 RAD23BP54727 409 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 SLC8A3P57103 927 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 YWHAEP62258 255 aaKnown RBP16.45■□□□□ 0.22
VPS33A-206ENST00000542310 STIM1Q13586 685 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 ANO4Q32M45 955 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 CBWD6Q4V339 395 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 ZNF394Q53GI3 561 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 RAB41Q5JT25 222 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 CBWD3Q5JTY5 395 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 CBWD5Q5RIA9 395 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 TCERG1LQ5VWI1 586 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 FOXR2Q6PJQ5 311 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 Q6ZNB5 142 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 SFTPA1Q8IWL2 248 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 ARHGAP18Q8N392 663 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 CCDC33Q8N5R6 958 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 OLIG1Q8TAK6 271 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 WBP2Q969T9 261 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 EEF2KMTQ96G04 330 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 HEXIM2Q96MH2 286 aaKnown RBP16.45■□□□□ 0.22
VPS33A-206ENST00000542310 XPO6Q96QU8 1125 aaKnown RBP16.45■□□□□ 0.22
VPS33A-206ENST00000542310 ARID3AQ99856 593 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 WDR35Q9P2L0 1181 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 ARMCX3Q9UH62 379 aaPredicted RBP16.45■□□□□ 0.22
VPS33A-206ENST00000542310 NAGPAQ9UK23 515 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 STARD13Q9Y3M8 1113 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 ABCA7Q8IZY2 2146 aa16.45■□□□□ 0.22
VPS33A-206ENST00000542310 SGK1O00141 431 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 PMM2O15305 246 aa16.44■□□□□ 0.22
VPS33A-206ENST00000542310 TBX18O95935 607 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms