RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 WBP11Q9Y2W2 641 aaKnown RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 PPP2R3BQ9Y5P8 575 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 CYP46A1Q9Y6A2 500 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 DIP2AQ14689 1571 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 TMEM2Q9UHN6 1383 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ZMYM6O95789 1325 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF532Q9HCE3 1301 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 KDM3AQ9Y4C1 1321 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 STRCQ7RTU9 1775 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 A0A087WZG4 1122 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 CCDC163A0A0D9SF12 145 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 C1orf232A0A0U1RR37 186 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 FAM237AA0A1B0GTK4 181 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 ILVBLA1L0T0 632 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 OR5K3A6NET4 321 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 GOLGA8JA6NMD2 632 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 CHURC1-FNTBB4DL54 471 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 C9orf172C9J069 976 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 FAM229AH3BQW9 127 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 INO80B-WBP1J3KQ70 363 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PDPK1O15530 556 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 AQP9O43315 295 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 KCNQ3O43525 872 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PEX1O43933 1283 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PDE8AO60658 829 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 DNAJA2O60884 412 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 FKBP6O75344 327 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 TOM1L1O75674 476 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 DDAH1O94760 285 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 AGTP01019 485 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 NTRK1P04629 796 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 C8BP07358 591 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 RETP07949 1114 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 FAM228BP0C875 321 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 ACRP10323 421 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PCNAP12004 261 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 COL6A2P12110 1019 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 GZMAP12544 262 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 NCAM1P13591 858 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF18P17022 549 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PTPN4P29074 926 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 AXLP30530 894 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 TTKP33981 857 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 NTF4P34130 210 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 EVI2BP34910 448 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 HOXD13P35453 343 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 ADCY8P40145 1251 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 SLC26A3P40879 764 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PRCPP42785 496 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 ASPAP45381 313 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 MMP13P45452 471 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 HARS2P49590 506 aaKnown RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 CEBPAP49715 358 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PLCD1P51178 756 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 COPAP53621 1224 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 AP2S1P53680 142 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PDE1AP54750 535 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PLTPP55058 493 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 POLR2GP62487 172 aaKnown RBP eCLIP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 RPP38P78345 283 aaKnown RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 COG7P83436 770 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PRKCEQ02156 737 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 CEBPZQ03701 1054 aaKnown RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PRKCQQ04759 706 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 NFIAQ12857 509 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 MTX1Q13505 466 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 GIT2Q14161 759 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 TTLL4Q14679 1199 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 NR1I3Q14994 352 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 KCNJ8Q15842 424 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 NFIL3Q16649 462 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 TDRD12Q587J7 1177 aaKnown RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 CLVS2Q5SYC1 327 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 C6orf163Q5TEZ5 329 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 SHEQ5VZ18 495 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 TMEM132EQ6IEE7 984 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF449Q6P9G9 518 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 AAGABQ6PD74 315 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 C15orf52Q6ZUT6 534 aaKnown RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PEX26Q7Z412 305 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 KCTD20Q7Z5Y7 419 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 RALYLQ86SE5 291 aaKnown RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 AKAP14Q86UN6 197 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 FAM83AQ86UY5 434 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 ALYREFQ86V81 257 aaKnown RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 CCDC25Q86WR0 208 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 NME9Q86XW9 330 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 COL23A1Q86Y22 540 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 STX12Q86Y82 276 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 TMEM126BQ8IUX1 230 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 C12orf56Q8IXR9 622 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 SMYD4Q8IYR2 804 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 CLYBLQ8N0X4 340 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 TEX19Q8NA77 164 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 KBTBD3Q8NAB2 608 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 C2CD4AQ8NCU7 369 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 SPATA4Q8NEY3 305 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 CEP70Q8NHQ1 597 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 LHFPL5Q8TAF8 219 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms