RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 DLL3Q9NYJ7 618 aa18.38■□□□□ 0.53
TRPT1-212ENST00000542040 MMP17Q9ULZ9 603 aa18.38■□□□□ 0.53
TRPT1-212ENST00000542040 OBSL1O75147 1896 aa18.37■□□□□ 0.53
TRPT1-212ENST00000542040 K7EQS6 105 aa18.37■□□□□ 0.53
TRPT1-212ENST00000542040 P4HA2O15460 535 aa18.37■□□□□ 0.53
TRPT1-212ENST00000542040 CHKAP35790 457 aa18.37■□□□□ 0.53
TRPT1-212ENST00000542040 CUL2Q13617 745 aa18.37■□□□□ 0.53
TRPT1-212ENST00000542040 PKN3Q6P5Z2 889 aa18.37■□□□□ 0.53
TRPT1-212ENST00000542040 RSRC2Q7L4I2 434 aaKnown RBP18.37■□□□□ 0.53
TRPT1-212ENST00000542040 WHAMMQ8TF30 809 aa18.37■□□□□ 0.53
TRPT1-212ENST00000542040 DDX1Q92499 740 aaKnown RBP18.37■□□□□ 0.53
TRPT1-212ENST00000542040 SEMA4DQ92854 862 aa18.37■□□□□ 0.53
TRPT1-212ENST00000542040 ZC3H10Q96K80 434 aaKnown RBP18.37■□□□□ 0.53
TRPT1-212ENST00000542040 KLF16Q9BXK1 252 aaPredicted RBP18.37■□□□□ 0.53
TRPT1-212ENST00000542040 CHMP5Q9NZZ3 219 aa18.37■□□□□ 0.53
TRPT1-212ENST00000542040 KIF26AQ9ULI4 1882 aaPredicted RBP18.37■□□□□ 0.53
TRPT1-212ENST00000542040 A0A1W2PQH9 124 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 PMM2O15305 246 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 CYP26A1O43174 497 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 VDRP11473 427 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 PTPRDP23468 1912 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 PXNP49023 591 aaPredicted RBP18.36■□□□□ 0.53
TRPT1-212ENST00000542040 BCAT1P54687 386 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 SRSF5Q13243 272 aaKnown RBP18.36■□□□□ 0.53
TRPT1-212ENST00000542040 STILQ15468 1287 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 GREB1Q4ZG55 1949 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 BBS7Q8IWZ6 715 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 SLC4A11Q8NBS3 891 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 ZFRQ96KR1 1074 aaKnown RBP18.36■□□□□ 0.53
TRPT1-212ENST00000542040 SPACA7Q96KW9 195 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 NT5C1BQ96P26 610 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 IPO9Q96P70 1041 aaKnown RBP18.36■□□□□ 0.53
TRPT1-212ENST00000542040 LRRC4Q9HBW1 653 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 OLA1Q9NTK5 396 aaKnown RBP18.36■□□□□ 0.53
TRPT1-212ENST00000542040 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.36■□□□□ 0.53
TRPT1-212ENST00000542040 C2orf42Q9NWW7 574 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 USP3Q9Y6I4 520 aa18.36■□□□□ 0.53
TRPT1-212ENST00000542040 HHLA1C9JL84 531 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 CYBBP04839 570 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 CD19P15391 556 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 GBP1P32455 592 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 TIE1P35590 1138 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 SLC6A11P48066 632 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 RAD23BP54727 409 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 CRY1Q16526 586 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 CBWD6Q4V339 395 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 CBWD3Q5JTY5 395 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 CBWD5Q5RIA9 395 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 GRAMD4Q6IC98 578 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 KLHL10Q6JEL2 608 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 PRR23CQ6ZRP0 262 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 TTC30AQ86WT1 665 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 TRIML1Q8N9V2 468 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 TATDN2Q93075 761 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 CNOT6LQ96LI5 555 aaKnown RBP18.35■□□□□ 0.53
TRPT1-212ENST00000542040 BBS2Q9BXC9 721 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 BCCIPQ9P287 314 aaKnown RBP eCLIP18.35■□□□□ 0.53
TRPT1-212ENST00000542040 MAN1B1Q9UKM7 699 aa18.35■□□□□ 0.53
TRPT1-212ENST00000542040 VPS13AQ96RL7 3174 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 ANAPC1Q9H1A4 1944 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 SCAMP3O14828 347 aaKnown RBP18.34■□□□□ 0.53
TRPT1-212ENST00000542040 EPN2O95208 641 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 KLF8O95600 359 aaPredicted RBP18.34■□□□□ 0.53
TRPT1-212ENST00000542040 DPP6P42658 865 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 FMO5P49326 533 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 BST2Q10589 180 aaKnown RBP18.34■□□□□ 0.53
TRPT1-212ENST00000542040 AASDHQ4L235 1098 aaPredicted RBP18.34■□□□□ 0.53
TRPT1-212ENST00000542040 NAIF1Q69YI7 327 aaPredicted RBP18.34■□□□□ 0.53
TRPT1-212ENST00000542040 ISM2Q6H9L7 571 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 CCDC33Q8N5R6 958 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 NAT16Q8N8M0 369 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 RNF139Q8WU17 664 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 NELFBQ8WX92 580 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 GOLGA1Q92805 767 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 SLC35C1Q96A29 364 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 FAM81BQ96LP2 452 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 ARRDC1-AS1Q9H2J1 176 aa18.34■□□□□ 0.53
TRPT1-212ENST00000542040 DNAJC17Q9NVM6 304 aaKnown RBP18.34■□□□□ 0.53
TRPT1-212ENST00000542040 TRIM49BA6NDI0 452 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 NEDD8-MDP1E9PL57 170 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 XPO1O14980 1071 aaKnown RBP18.33■□□□□ 0.52
TRPT1-212ENST00000542040 MAP3K13O43283 966 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 TULP3O75386 442 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 TBX18O95935 607 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 ZBED1O96006 694 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 PAEPP09466 180 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 ZNF806P0C7X5 589 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 SETSIPP0DME0 302 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 YWHAGP61981 247 aaKnown RBP eCLIP18.33■□□□□ 0.52
TRPT1-212ENST00000542040 KDSRQ06136 332 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 IL31Q6EBC2 164 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 ANO7Q6IWH7 933 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 GPRIN1Q7Z2K8 1008 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 KBTBD6Q86V97 674 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 PIGZQ86VD9 579 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 TMEM25Q86YD3 366 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 MIB1Q86YT6 1006 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 SIX6OS1Q8N1H7 587 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 PGBD3Q8N328 593 aa18.33■□□□□ 0.52
TRPT1-212ENST00000542040 ZNF513Q8N8E2 541 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms