RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 LSM14BQ9BX40 385 aaKnown RBP10.23□□□□□ -0.77
YBX3-212ENST00000542002 OSBPL6Q9BZF3 934 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 GANQ9H2C0 597 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 C8orf33Q9H7E9 229 aaPredicted RBP10.23□□□□□ -0.77
YBX3-212ENST00000542002 LMAN1LQ9HAT1 526 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 RBM12Q9NTZ6 932 aaKnown RBP10.23□□□□□ -0.77
YBX3-212ENST00000542002 C2orf42Q9NWW7 574 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 CLIC5Q9NZA1 410 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 TJP2Q9UDY2 1190 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 SIK3Q9Y2K2 1263 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 COL4A2P08572 1712 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 OBSL1O75147 1896 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 USP34Q70CQ2 3546 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 E2F8A0AVK6 867 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 H0Y858 1186 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 MAN2B1O00754 1011 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 TEX33O43247 280 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 THAP12O43422 761 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 FYNP06241 537 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 SETSIPP0DME0 302 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 IRF1P10914 325 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 UCHL3P15374 230 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 GNA15P30679 374 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 SLC6A11P48066 632 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 DAOAP59103 153 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 YWHAGP61981 247 aaKnown RBP eCLIP10.22□□□□□ -0.77
YBX3-212ENST00000542002 MESP2Q0VG99 397 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 C10orf120Q5SQS8 335 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 BSPRYQ5W0U4 402 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 KLHDC10Q6PID8 442 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 HTR3DQ70Z44 454 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 BBS7Q8IWZ6 715 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 EDEM1Q92611 657 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 EZH1Q92800 747 aaPredicted RBP10.22□□□□□ -0.77
YBX3-212ENST00000542002 NELL2Q99435 816 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 PHOX2BQ99453 314 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 SLC4A5Q9BY07 1137 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 STK33Q9BYT3 514 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 LRRC4Q9HBW1 653 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 PLCB1Q9NQ66 1216 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 DNMT3LQ9UJW3 386 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 HCN4Q9Y3Q4 1203 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 ARIH1Q9Y4X5 557 aaPredicted RBP10.22□□□□□ -0.77
YBX3-212ENST00000542002 DENND4CQ5VZ89 1909 aa10.22□□□□□ -0.77
YBX3-212ENST00000542002 ANAPC1Q9H1A4 1944 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 FAM170AA1A519 330 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 TRDMT1O14717 391 aaKnown RBP10.21□□□□□ -0.77
YBX3-212ENST00000542002 CYP17A1P05093 508 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 CDK11BP21127 795 aaKnown RBP10.21□□□□□ -0.77
YBX3-212ENST00000542002 RFX1P22670 979 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 IFNAR2P48551 515 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 PSEN1P49768 467 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 ZNF165P49910 485 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 SLC8A3P57103 927 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 EFEMP1Q12805 493 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 MTAPQ13126 283 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 CCINQ13939 588 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 DHCR24Q15392 516 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 SYCP1Q15431 976 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 STILQ15468 1287 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 TAF5Q15542 800 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 TMEM196Q5HYL7 178 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 FSTL4Q6MZW2 842 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 TMEM110Q86TL2 294 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 TMEM25Q86YD3 366 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 MIB1Q86YT6 1006 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 PASD1Q8IV76 773 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 SFTPA1Q8IWL2 248 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 SCML4Q8N228 414 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 DDX1Q92499 740 aaKnown RBP10.21□□□□□ -0.77
YBX3-212ENST00000542002 ATP2A3Q93084 1043 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 HSFY1Q96LI6 401 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 FAM81BQ96LP2 452 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 NAP1L5Q96NT1 182 aaPredicted RBP10.21□□□□□ -0.77
YBX3-212ENST00000542002 DCBLD2Q96PD2 775 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 NACA2Q9H009 215 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 MIS12Q9H081 205 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 FAM207AQ9NSI2 230 aaPredicted RBP10.21□□□□□ -0.77
YBX3-212ENST00000542002 POLR3BQ9NW08 1133 aaPredicted RBP10.21□□□□□ -0.77
YBX3-212ENST00000542002 SFMBT1Q9UHJ3 866 aa10.21□□□□□ -0.77
YBX3-212ENST00000542002 NUP210Q8TEM1 1887 aaPredicted RBP10.21□□□□□ -0.78
YBX3-212ENST00000542002 ZNF318Q5VUA4 2279 aa10.21□□□□□ -0.78
YBX3-212ENST00000542002 ZDBF2Q9HCK1 2354 aa10.21□□□□□ -0.78
YBX3-212ENST00000542002 LGALS16A8MUM7 142 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 F8VZ95 297 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 PAPSS1O43252 624 aaPredicted RBP10.2□□□□□ -0.78
YBX3-212ENST00000542002 STC2O76061 302 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 EGFP01133 1207 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 HMBSP08397 361 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 RALAP11233 206 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 CYP11B1P15538 503 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 OPRD1P41143 372 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 RPS9P46781 194 aaKnown RBP10.2□□□□□ -0.78
YBX3-212ENST00000542002 NUBP1P53384 320 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 JAM2P57087 298 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 POLR2FP61218 127 aaKnown RBP10.2□□□□□ -0.78
YBX3-212ENST00000542002 NHLH1Q02575 133 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 UBXN1Q04323 297 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 PTK2Q05397 1052 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 RAPGEF1Q13905 1077 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms