RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 NECTIN3Q9NQS3 549 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 SMC4Q9NTJ3 1288 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 KIF17Q9P2E2 1029 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 SLC17A6Q9P2U8 582 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 CRYL1Q9Y2S2 319 aa4.83□□□□□ -1.64
SNHG1-217ENST00000541578 IQGAP2Q13576 1575 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 YEATS2Q9ULM3 1422 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 F5H697 171 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 MBD4O95243 580 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 TXNP10599 105 aaKnown RBP4.82□□□□□ -1.64
SNHG1-217ENST00000541578 TPH1P17752 444 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 NPTX2P47972 431 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 SLC11A2P49281 568 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 COPAP53621 1224 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 UCP3P55916 312 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 HTRA4P83105 476 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-217ENST00000541578 KRT17Q04695 432 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 GALNT1Q10472 559 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-217ENST00000541578 FOXO1Q12778 655 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 PTK2BQ14289 1009 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 PTPRRQ15256 657 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 INSCQ1MX18 579 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 NBPF8Q3BBV2 869 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 ZNF362Q5T0B9 420 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-217ENST00000541578 INTS11Q5TA45 600 aaKnown RBP4.82□□□□□ -1.64
SNHG1-217ENST00000541578 DCAF12L1Q5VU92 463 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 USP17L6PQ6QN14 398 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 SLC30A10Q6XR72 485 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 USP37Q86T82 979 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 C2CD5Q86YS7 1000 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 FAM98AQ8NCA5 519 aaKnown RBP4.82□□□□□ -1.64
SNHG1-217ENST00000541578 B3GALNT2Q8NCR0 500 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 CYP2W1Q8TAV3 490 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 MAML1Q92585 1016 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 PYM1Q9BRP8 204 aaKnown RBP4.82□□□□□ -1.64
SNHG1-217ENST00000541578 SMURF2Q9HAU4 748 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 SAYSD1Q9NPB0 183 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 MID2Q9UJV3 735 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 SPATA31D1Q6ZQQ2 1576 aa4.82□□□□□ -1.64
SNHG1-217ENST00000541578 IQSEC2Q5JU85 1478 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 A0A0B4J269 797 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 LOC102723971A0A1B0GUV8 181 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 TMEM233B4DJY2 109 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 FCHO1O14526 889 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 MGST3O14880 152 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 TRIAP1O43715 76 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 SOAT2O75908 522 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 FBLP22087 321 aaKnown RBP4.81□□□□□ -1.64
SNHG1-217ENST00000541578 CNTFP26441 200 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 ACVR2AP27037 513 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 CD38P28907 300 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 HSPA2P54652 639 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 NXPH1P58417 271 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 ITIH3Q06033 890 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 TUBB3Q13509 450 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 HYIQ5T013 277 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 SULT6B1Q6IMI4 303 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 LAYNQ6UX15 382 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 ARHGEF25Q86VW2 580 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 MICU3Q86XE3 530 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 PDILTQ8N807 584 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 IL17REQ8NFR9 667 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 OR56A3Q8NH54 315 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 MYCBPAPQ8TBZ2 947 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 TFAP2BQ92481 460 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 TINAGL1Q9GZM7 467 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-217ENST00000541578 SEMA4GQ9NTN9 838 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 IRAK4Q9NWZ3 460 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 ETAA1Q9NY74 926 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 RGL1Q9NZL6 768 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 PDP2Q9P2J9 529 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 XPR1Q9UBH6 696 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 HERC5Q9UII4 1024 aaKnown RBP4.81□□□□□ -1.64
SNHG1-217ENST00000541578 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.81□□□□□ -1.642e-26■□□□□ 8.9
SNHG1-217ENST00000541578 GOLGA3Q08378 1498 aa4.81□□□□□ -1.64
SNHG1-217ENST00000541578 COL11A2P13942 1736 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-217ENST00000541578 A0A087WWL8 130 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 DYTNA2CJ06 578 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 MASP2O00187 686 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 TCERG1O14776 1098 aaKnown RBP4.8□□□□□ -1.64
SNHG1-217ENST00000541578 COQ9O75208 318 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 VPS4BO75351 444 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 TNFRSF6BO95407 300 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 IGLV2-14P01704 120 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 LDHCP07864 332 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 CHRM2P08172 466 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 CYP2C9P11712 490 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 PPP3CBP16298 524 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 ELF1P32519 619 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 GRIA3P42263 894 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 NDUFV1P49821 464 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 ALDH18A1P54886 795 aaKnown RBP4.8□□□□□ -1.64
SNHG1-217ENST00000541578 TCF15Q12870 199 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 ARHGEF7Q14155 803 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 SIM2Q14190 667 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-217ENST00000541578 CCDC142Q17RM4 750 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 AKNAD1Q5T1N1 836 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 ATPAF1Q5TC12 328 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-217ENST00000541578 CACHD1Q5VU97 1274 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 FAM160B1Q5W0V3 765 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms