RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 CNTFP26441 200 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 AKR1D1P51857 326 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 LMBRD2Q68DH5 695 aaPredicted RBP15.8■□□□□ 0.12
HMGA2-210ENST00000541363 C1QTNF1Q9BXJ1 281 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 UGT2B28Q9BY64 529 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 METTL5Q9NRN9 209 aaKnown RBP15.8■□□□□ 0.12
HMGA2-210ENST00000541363 OR1G1P47890 313 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 MIIPQ5JXC2 388 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 ARHGAP28Q9P2N2 729 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 HALP42357 657 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 ITGB3BPQ13352 177 aaPredicted RBP15.8■□□□□ 0.12
HMGA2-210ENST00000541363 R3HDM1Q15032 1099 aaKnown RBP15.8■□□□□ 0.12
HMGA2-210ENST00000541363 PDPK2PQ6A1A2 396 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 CYB5D1Q6P9G0 228 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 COL23A1Q86Y22 540 aaPredicted RBP15.8■□□□□ 0.12
HMGA2-210ENST00000541363 WDR60Q8WVS4 1066 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 KLF6Q99612 283 aaPredicted RBP15.8■□□□□ 0.12
HMGA2-210ENST00000541363 AAASQ9NRG9 546 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
HMGA2-210ENST00000541363 CTTNBP2Q8WZ74 1663 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 TNFAIP8O95379 198 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 CRTAMO95727 393 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 FDX1P10109 184 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 STIP1P31948 543 aaKnown RBP15.8■□□□□ 0.12
HMGA2-210ENST00000541363 PACS1Q6VY07 963 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 AGMOQ6ZNB7 445 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 SGF29Q96ES7 293 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 NUAK2Q9H093 628 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 BTBD7Q9P203 1132 aa15.8■□□□□ 0.12
HMGA2-210ENST00000541363 RPS6KA5O75582 802 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 EYA4O95677 639 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 CBX5P45973 191 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 EZH2Q15910 746 aaKnown RBP15.79■□□□□ 0.12
HMGA2-210ENST00000541363 TMEM132CQ8N3T6 1108 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 ADGRE3Q9BY15 652 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 ADPRHL2Q9NX46 363 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 BARHL2Q9NY43 387 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 VTI1BQ9UEU0 232 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 CLUP10909 449 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 HPCAL1P37235 193 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 NEDD8Q15843 81 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 MARK2Q7KZI7 788 aaKnown RBP15.79■□□□□ 0.12
HMGA2-210ENST00000541363 FAM172AQ8WUF8 416 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 EHD3Q9NZN3 535 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 MARK1Q9P0L2 795 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 F5H5T6 163 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 HS6ST1O60243 411 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 KRT33AO76009 404 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 ACLYP53396 1101 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 SKP1P63208 163 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 CYP20A1Q6UW02 462 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 ZNF677Q86XU0 584 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.79■□□□□ 0.12
HMGA2-210ENST00000541363 A0A0B4J269 797 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 TEX46H3BTG2 121 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 KLHL41O60662 606 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 ANXA6P08133 673 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 HSD3B2P26439 372 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 GMFBP60983 142 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 ABATP80404 500 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 TUBB3Q13509 450 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 ZNF846Q147U1 533 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 TSPAN14Q8NG11 270 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 ELL3Q9HB65 397 aaPredicted RBP15.79■□□□□ 0.12
HMGA2-210ENST00000541363 MPOP05164 745 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 NPR3P17342 541 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 KCNA6P17658 529 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 ARHGAP22Q7Z5H3 698 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 CCDC33Q8N5R6 958 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 OSBP2Q969R2 916 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 SEC31BQ9NQW1 1179 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 TMEM260Q9NX78 707 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 CCDC154A6NI56 674 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 JAMLQ86YT9 394 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 TBCDQ9BTW9 1192 aa15.79■□□□□ 0.12
HMGA2-210ENST00000541363 DRG1Q9Y295 367 aaKnown RBP15.79■□□□□ 0.12
HMGA2-210ENST00000541363 ACOT2P49753 483 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 STARD3Q14849 445 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 SAMD3Q8N6K7 520 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 PROX1Q92786 737 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 NEUROD4Q9HD90 331 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.78■□□□□ 0.12
HMGA2-210ENST00000541363 ZNF879B4DU55 563 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 RBMXL2O75526 392 aaKnown RBP15.78■□□□□ 0.12
HMGA2-210ENST00000541363 RASA1P20936 1047 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 TMED8Q6PL24 325 aaPredicted RBP15.78■□□□□ 0.12
HMGA2-210ENST00000541363 GCC2Q8IWJ2 1684 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 AHCYL2Q96HN2 611 aaKnown RBP15.78■□□□□ 0.12
HMGA2-210ENST00000541363 BBS4Q96RK4 519 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 SMCO3A2RU48 225 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.78■□□□□ 0.12
HMGA2-210ENST00000541363 STX16-NPEPL1H3BU86 382 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 STX16O14662 325 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 RBP1P09455 135 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 TCF4P15884 667 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 GALCP54803 685 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 EIF2S3LQ2VIR3 472 aaKnown RBP15.78■□□□□ 0.12
HMGA2-210ENST00000541363 CCSAPQ6IQ19 270 aaPredicted RBP15.78■□□□□ 0.12
HMGA2-210ENST00000541363 GLB1LQ6UWU2 654 aa15.78■□□□□ 0.12
HMGA2-210ENST00000541363 ABRAXAS1Q6UWZ7 409 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms