RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 MSS51Q4VC12 460 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 XYLT1Q86Y38 959 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 INPP5DQ92835 1189 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 NT5C1AQ9BXI3 368 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 UBQLN1Q9UMX0 589 aaKnown RBP17.88■□□□□ 0.45
SPIDR-227ENST00000541342 hCG_1818297A0A087WSY0 165 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 GOLGA8MH3BSY2 632 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 PIRO00625 290 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 HMGCRP04035 888 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 RFC1P35251 1148 aaPredicted RBP17.88■□□□□ 0.45
SPIDR-227ENST00000541342 VCPP55072 806 aaKnown RBP17.88■□□□□ 0.45
SPIDR-227ENST00000541342 ZNF449Q6P9G9 518 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 ANKMY2Q8IV38 441 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 AGGF1Q8N302 714 aaeCLIP17.88■□□□□ 0.452e-6■■□□□ 12.5
SPIDR-227ENST00000541342 JOSD2Q8TAC2 188 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 RBM41Q96IZ5 413 aaKnown RBP17.88■□□□□ 0.45
SPIDR-227ENST00000541342 FAM124BQ9H5Z6 455 aaPredicted RBP17.88■□□□□ 0.45
SPIDR-227ENST00000541342 XPNPEP3Q9NQH7 507 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 STRIP2Q9ULQ0 834 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 FARP1Q9Y4F1 1045 aaPredicted RBP17.88■□□□□ 0.45
SPIDR-227ENST00000541342 CCDC189A1A4V9 331 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 TJP3O95049 919 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 CHRNA1P02708 482 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 KCNE1P15382 129 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 PDIA2Q13087 525 aaKnown RBP17.88■□□□□ 0.45
SPIDR-227ENST00000541342 LRRC8CQ8TDW0 803 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 MZB1Q8WU39 189 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 ZNF75CPQ92670 426 aaPredicted RBP17.88■□□□□ 0.45
SPIDR-227ENST00000541342 C12orf65Q9H3J6 166 aaKnown RBP17.88■□□□□ 0.45
SPIDR-227ENST00000541342 SAE1Q9UBE0 346 aaPredicted RBP17.88■□□□□ 0.45
SPIDR-227ENST00000541342 RABGEF1Q9UJ41 708 aa17.88■□□□□ 0.45
SPIDR-227ENST00000541342 DRG1Q9Y295 367 aaKnown RBP17.88■□□□□ 0.45
SPIDR-227ENST00000541342 SPTLC1O15269 473 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 HCRTO43612 131 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 ATP5HO75947 161 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 ASGR1P07306 291 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 PFKMP08237 780 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 CTSHP09668 335 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 TPBGLP0DKB5 382 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 KRT4P19013 534 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 CDKN2BP42772 138 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 PSMC1P62191 440 aaKnown RBP17.87■□□□□ 0.45
SPIDR-227ENST00000541342 NOGQ13253 232 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 SOWAHAQ2M3V2 549 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 FAM47CQ5HY64 1035 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 EFHC2Q5JST6 749 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 ANKRD22Q5VYY1 191 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 TWF2Q6IBS0 349 aaKnown RBP17.87■□□□□ 0.45
SPIDR-227ENST00000541342 LVRNQ6Q4G3 990 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 CEP128Q6ZU80 1094 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 NKD2Q969F2 451 aaPredicted RBP17.87■□□□□ 0.45
SPIDR-227ENST00000541342 C10orf88Q9H8K7 445 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 SPC25Q9HBM1 224 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 SENP1Q9P0U3 644 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 TSPAN16Q9UKR8 245 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 PRKAR2AP13861 404 aaKnown RBP17.87■□□□□ 0.45
SPIDR-227ENST00000541342 GDF10P55107 478 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 RASA2Q15283 850 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 TAF1BQ53T94 588 aaPredicted RBP17.87■□□□□ 0.45
SPIDR-227ENST00000541342 LCLAT1Q6UWP7 414 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 SERINC5Q86VE9 423 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 PSMC3IPQ9P2W1 217 aaPredicted RBP17.87■□□□□ 0.45
SPIDR-227ENST00000541342 SHOC2Q9UQ13 582 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 TRPV2Q9Y5S1 764 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 THSD7BQ9C0I4 1608 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 C3orf70A6NLC5 250 aaPredicted RBP17.87■□□□□ 0.45
SPIDR-227ENST00000541342 SIGLEC16A6NMB1 481 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 MEIS3P2A8K0S8 358 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 TRAFD1O14545 582 aaPredicted RBP17.87■□□□□ 0.45
SPIDR-227ENST00000541342 DCTN3O75935 186 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 ITGAVP06756 1048 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 CALB2P22676 271 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 GABRB2P47870 512 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 TAP1Q03518 808 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 KCNA10Q16322 511 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 ACOT1Q86TX2 421 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 SESTD1Q86VW0 696 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 LPIN3Q9BQK8 851 aa17.87■□□□□ 0.45
SPIDR-227ENST00000541342 SENP6Q9GZR1 1112 aaPredicted RBP17.87■□□□□ 0.45
SPIDR-227ENST00000541342 MYCNP04198 464 aaPredicted RBP17.86■□□□□ 0.45
SPIDR-227ENST00000541342 KRT3P12035 628 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 ADRA1DP25100 572 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 SP3Q02447 781 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 FNBP1LQ5T0N5 605 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 PPP1R26Q5T8A7 1209 aaPredicted RBP17.86■□□□□ 0.45
SPIDR-227ENST00000541342 CCSAPQ6IQ19 270 aaPredicted RBP17.86■□□□□ 0.45
SPIDR-227ENST00000541342 LONP2Q86WA8 852 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 TTC39CQ8N584 583 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 NIPA2Q8N8Q9 360 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 KLHDC9Q8NEP7 349 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 MIPEPQ99797 713 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 SLC24A2Q9UI40 661 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 ST3GAL5Q9UNP4 418 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 SSTR1P30872 391 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 PTPN7P35236 360 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 BLMHQ13867 455 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 ARFGAP1Q8N6T3 406 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 TTC8Q8TAM2 541 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 SLC35B2Q8TB61 432 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 STK32AQ8WU08 396 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms