RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 DNAAF3Q8N9W5 541 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 TCP10LQ8TDR4 215 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 USP6NLQ92738 828 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 DPF3Q92784 378 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 TMEM143Q96AN5 459 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 ALKBH8Q96BT7 664 aaKnown RBP5.43□□□□□ -1.54
PROM1-220ENST00000540805 OXNAD1Q96HP4 312 aaPredicted RBP5.43□□□□□ -1.54
PROM1-220ENST00000540805 WNK4Q96J92 1243 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 SPATA17Q96L03 361 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 DHRS1Q96LJ7 313 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 TSPAN18Q96SJ8 248 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 TTC1Q99614 292 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 SIK2Q9H0K1 926 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 VPS11Q9H270 941 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 CCDC68Q9H2F9 335 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 CPA4Q9UI42 421 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 DNAJC13O75165 2243 aa5.43□□□□□ -1.54
PROM1-220ENST00000540805 H3BRJ5 948 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 NEMP1O14524 444 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 OPHN1O60890 802 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ASLP04424 464 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 CRABP2P29373 138 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 HOXD12P35452 270 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 CDC16Q13042 620 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 PDIA2Q13087 525 aaKnown RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 SNAPC2Q13487 334 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ZNF667Q5HYK9 610 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TRIM67Q6ZTA4 783 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 LRRC6Q86X45 466 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TMPRSS6Q8IU80 811 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 RHOT1Q8IXI2 618 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 PALM2Q8IXS6 379 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.42□□□□□ -1.54
PROM1-220ENST00000540805 OR6J1Q8NGC5 347 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 BHMTQ93088 406 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 HAUS1Q96CS2 278 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TRIM11Q96F44 468 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TMEM117Q9H0C3 514 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ALG13Q9NP73 1137 aaKnown RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 AVENQ9NQS1 362 aaPredicted RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 FEM1BQ9UK73 627 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 PRG3Q9Y2Y8 225 aaPredicted RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 SPTBN2O15020 2390 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ZNF541Q9H0D2 1346 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 A0A1B0GTW7 788 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 A6NL46 340 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 B2RBV5 119 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 F5H423 210 aaPredicted RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 PIK3R2O00459 728 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 DPYSL4O14531 572 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TGDSO95455 350 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 PGK2P07205 417 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 FDX1P10109 184 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 CPB1P15086 417 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 HSD17B4P51659 736 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ARSEP51690 589 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 STAT5BP51692 787 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 KPNA1P52294 538 aaPredicted RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 ARL4CP56559 192 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 PTP4A2Q12974 167 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 GPS1Q13098 491 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 MORF4L2Q15014 288 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ANKDD1AQ495B1 522 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 SH2D4BQ5SQS7 431 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TMTC4Q5T4D3 741 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 FAM91A1Q658Y4 838 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 RIPOR1Q6ZS17 1223 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ACAD11Q709F0 780 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TTC7BQ86TV6 843 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ANKRD13AQ8IZ07 590 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 XXYLT1Q8NBI6 393 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 PPP4R1Q8TF05 950 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 NAT14Q8WUY8 206 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 HSD17B14Q9BPX1 270 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TMEM206Q9H813 350 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ZNF302Q9NR11 478 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TOPORSQ9NS56 1045 aaPredicted RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 KCND2Q9NZV8 630 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 SLC17A7Q9P2U7 560 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 DNAJB4Q9UDY4 337 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ZNF112Q9UJU3 913 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 PIN4Q9Y237 131 aaKnown RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 TMEM98Q9Y2Y6 226 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 SPECC1L-ADORA2AF8WAN1 911 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ZBTB39O15060 712 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ALOX15BO15296 676 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 PSMD10O75832 226 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 SORBS2O94875 1100 aaKnown RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 PROSCO94903 275 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 SLITRK3O94933 977 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ENO1P06733 434 aaKnown RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 NR3C2P08235 984 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 MYL2P10916 166 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 EPHX2P34913 555 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 RCVRNP35243 200 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 QARSP47897 775 aaKnown RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 RGS19P49795 217 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 GK3PQ14409 553 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 KLHL38Q2WGJ6 581 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms