RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 C5orf42Q9H799 3197 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 FAM170AA1A519 330 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 OLFM2O95897 454 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 LTFP02788 710 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 HNRNPH3P31942 346 aaKnown RBP16.24■□□□□ 0.19
DDB1-218ENST00000540784 NSFP46459 744 aaKnown RBP16.24■□□□□ 0.19
DDB1-218ENST00000540784 GABRB2P47870 512 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 YWHAZP63104 245 aaKnown RBP16.24■□□□□ 0.19
DDB1-218ENST00000540784 SLC6A3Q01959 620 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 TDRD12Q587J7 1177 aaKnown RBP16.24■□□□□ 0.19
DDB1-218ENST00000540784 ACAD10Q6JQN1 1059 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 KLHDC10Q6PID8 442 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 VPS36Q86VN1 386 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 CNGA4Q8IV77 575 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 MFSD6LQ8IWD5 586 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 YAF2Q8IY57 180 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 TTC16Q8NEE8 873 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 EDEM1Q92611 657 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 FAM149B1Q96BN6 582 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 DNAJC7Q99615 494 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 SYT11Q9BT88 431 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.24■□□□□ 0.19
DDB1-218ENST00000540784 TRIM62Q9BVG3 475 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 KIF9Q9HAQ2 790 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 THG1LQ9NWX6 298 aaKnown RBP16.24■□□□□ 0.19
DDB1-218ENST00000540784 SMPD4Q9NXE4 827 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 TJP2Q9UDY2 1190 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 CCL26Q9Y258 94 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 CPQQ9Y646 472 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 DENND4AQ7Z401 1863 aa16.24■□□□□ 0.19
DDB1-218ENST00000540784 GOLGA6L3A6NEY3 463 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 CAPN9O14815 690 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 MFAP3LO75121 409 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 PRAMEF12O95522 483 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 GLI1P08151 1106 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 PSMC3P17980 439 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 MMP8P22894 467 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 GOLGA8FQ08AF8 430 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 GOLGA8DPQ0D2H9 430 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 HGSNATQ68CP4 663 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 PPP1R2P3Q6NXS1 205 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 VITQ6UXI7 678 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 TOGARAM2Q6ZUX3 1019 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 HFE2Q6ZVN8 426 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 FAM183BPQ6ZVS7 135 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 PHF13Q86YI8 300 aaPredicted RBP16.23■□□□□ 0.19
DDB1-218ENST00000540784 BPIFB1Q8TDL5 484 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 SH3RF2Q8TEC5 729 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 DEPDC1BQ8WUY9 529 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 RSPRY1Q96DX4 576 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 LRRC3BQ96PB8 259 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 TRMT61BQ9BVS5 477 aaKnown RBP16.23■□□□□ 0.19
DDB1-218ENST00000540784 GKN1Q9NS71 199 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 OLA1Q9NTK5 396 aaKnown RBP16.23■□□□□ 0.19
DDB1-218ENST00000540784 ADAM22Q9P0K1 906 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 STRIP2Q9ULQ0 834 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 SORCS3Q9UPU3 1222 aa16.23■□□□□ 0.19
DDB1-218ENST00000540784 UNC80Q8N2C7 3258 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 LEFTY2O00292 366 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 DDX3XO00571 662 aaKnown RBP eCLIP16.22■□□□□ 0.19
DDB1-218ENST00000540784 GZMAP12544 262 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 NCAM1P13591 858 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 CENPCQ03188 943 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 EFEMP1Q12805 493 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 ARID5BQ14865 1188 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 TAF5Q15542 800 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 C2CD6Q53TS8 623 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 CC2D1AQ6P1N0 951 aaPredicted RBP16.22■□□□□ 0.19
DDB1-218ENST00000540784 MMS22LQ6ZRQ5 1243 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 BEND5Q7L4P6 421 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 DDX42Q86XP3 938 aaKnown RBP eCLIP16.22■□□□□ 0.19
DDB1-218ENST00000540784 XYLT1Q86Y38 959 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 KLF16Q9BXK1 252 aaPredicted RBP16.22■□□□□ 0.19
DDB1-218ENST00000540784 POPDC2Q9HBU9 364 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 ABHD10Q9NUJ1 306 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 ASNSD1Q9NWL6 643 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 MARCH2Q9P0N8 246 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 ADAMTS1Q9UHI8 967 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 RASAL2Q9UJF2 1139 aa16.22■□□□□ 0.19
DDB1-218ENST00000540784 TMCO5BA8MYB1 307 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 ZNF263O14978 683 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 MDM4O15151 490 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 HSF2BPO75031 334 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 CALB1P05937 261 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 FYNP06241 537 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 PLEKP08567 350 aaPredicted RBP16.21■□□□□ 0.19
DDB1-218ENST00000540784 TCF3P15923 654 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 CDC25BP30305 580 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 GDI1P31150 447 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 RNASE9P60153 205 aaKnown RBP16.21■□□□□ 0.19
DDB1-218ENST00000540784 GPC5P78333 572 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 COG7P83436 770 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 ZXDBP98169 803 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 GRM2Q14416 872 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 WDR59Q6PJI9 974 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 OLFML1Q6UWY5 402 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 PHLDB2Q86SQ0 1253 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 MIB1Q86YT6 1006 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 C11orf70Q9BRQ4 267 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 CFAP97Q9P2B7 532 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms