RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 KCNK16Q96T55 309 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 GTPBP2Q9BX10 602 aaKnown RBP7.75□□□□□ -1.17
YBX3-209ENST00000540747 SNX25Q9H3E2 840 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 KIAA1586Q9HCI6 787 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 AGPAT3Q9NRZ7 376 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 COMMD8Q9NX08 183 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 GMIPQ9P107 970 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 CCDC39Q9UFE4 941 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 FBXO10Q9UK96 956 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 SMC3Q9UQE7 1217 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 NFE2L3Q9Y4A8 694 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 ADAMTS20P59510 1910 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 PLXNB3Q9ULL4 1909 aa7.75□□□□□ -1.17
YBX3-209ENST00000540747 CEP192Q8TEP8 1941 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 GFRA2O00451 464 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 EIF3DO15371 548 aaKnown RBP eCLIP7.74□□□□□ -1.17
YBX3-209ENST00000540747 FTH1P19P0C7X4 201 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 MYL6P60660 151 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 CLDN10P78369 228 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 BNC1Q01954 994 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 GRIK2Q13002 908 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 CUL4AQ13619 759 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 TRIP6Q15654 476 aaKnown RBP7.74□□□□□ -1.17
YBX3-209ENST00000540747 WDR72Q3MJ13 1102 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 GRAMD4Q6IC98 578 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 Q6ZNB5 142 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 DBX2Q6ZNG2 339 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 TOGARAM2Q6ZUX3 1019 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 HS2ST1Q7LGA3 356 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 SLCO6A1Q86UG4 719 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 NAXDQ8IW45 347 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 C12orf56Q8IXR9 622 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 FUKQ8N0W3 1084 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 PGBD3Q8N328 593 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 DEFB119Q8N690 84 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 NAT16Q8N8M0 369 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 RBBP8NLQ8NC74 664 aaPredicted RBP7.74□□□□□ -1.17
YBX3-209ENST00000540747 OR6B3Q8NGW1 331 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 C1orf216Q8TAB5 229 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 ZNF507Q8TCN5 953 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 MRGPRX1Q96LB2 322 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 MMS19Q96T76 1030 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 SMOQ99835 787 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 KLF16Q9BXK1 252 aaPredicted RBP7.74□□□□□ -1.17
YBX3-209ENST00000540747 SDCBP2Q9H190 292 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 SLC6A17Q9H1V8 727 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 SMYD3Q9H7B4 428 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 CSNK1G1Q9HCP0 422 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 DMAP1Q9NPF5 467 aaPredicted RBP7.74□□□□□ -1.17
YBX3-209ENST00000540747 CYLDQ9NQC7 956 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 KBTBD4Q9NVX7 518 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 TOR4AQ9NXH8 423 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 USP36Q9P275 1121 aaKnown RBP7.74□□□□□ -1.17
YBX3-209ENST00000540747 DKK4Q9UBT3 224 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 CHORDC1Q9UHD1 332 aaPredicted RBP7.74□□□□□ -1.17
YBX3-209ENST00000540747 CIZ1Q9ULV3 898 aaPredicted RBP7.74□□□□□ -1.17
YBX3-209ENST00000540747 CYP8B1Q9UNU6 501 aa7.74□□□□□ -1.17
YBX3-209ENST00000540747 URB1O60287 2271 aaKnown RBP7.74□□□□□ -1.17
YBX3-209ENST00000540747 ZNF462Q96JM2 2506 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 A8MXQ7 604 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 HHLA1C9JL84 531 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 TLR5O60602 858 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 BEST1O76090 585 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 ABL1P00519 1130 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 PENKP01210 267 aaPredicted RBP7.73□□□□□ -1.17
YBX3-209ENST00000540747 IGLV3-19P01714 112 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 SYPP08247 313 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 ZNF883P0CG24 379 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 DLATP10515 647 aaKnown RBP7.73□□□□□ -1.17
YBX3-209ENST00000540747 TYRP14679 529 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 ATICP31939 592 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 DEKP35659 375 aaKnown RBP7.73□□□□□ -1.17
YBX3-209ENST00000540747 STAT6P42226 847 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 WASP42768 502 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 ATXN3P54252 364 aaPredicted RBP7.73□□□□□ -1.17
YBX3-209ENST00000540747 TNNC1P63316 161 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 SLC39A14Q15043 492 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 BMT2Q1RMZ1 405 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 PREPLQ4J6C6 727 aaPredicted RBP7.73□□□□□ -1.17
YBX3-209ENST00000540747 BTBD8Q5XKL5 378 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 FAM173BQ6P4H8 233 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 PDZD3Q86UT5 571 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 CCDC65Q8IXS2 484 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 NOC3LQ8WTT2 800 aaKnown RBP7.73□□□□□ -1.17
YBX3-209ENST00000540747 SCFD1Q8WVM8 642 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 SMARCD1Q96GM5 515 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 BBC3Q96PG8 261 aaPredicted RBP7.73□□□□□ -1.17
YBX3-209ENST00000540747 ZDHHC5Q9C0B5 715 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 TNMDQ9H2S6 317 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 FAM124BQ9H5Z6 455 aaPredicted RBP7.73□□□□□ -1.17
YBX3-209ENST00000540747 DNAJC17Q9NVM6 304 aaKnown RBP7.73□□□□□ -1.17
YBX3-209ENST00000540747 OSER1Q9NX31 292 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 WSB2Q9NYS7 404 aaPredicted RBP7.73□□□□□ -1.17
YBX3-209ENST00000540747 KIAA1522Q9P206 1035 aaPredicted RBP7.73□□□□□ -1.17
YBX3-209ENST00000540747 SUSD2Q9UGT4 822 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 PCOLCE2Q9UKZ9 415 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 SLC27A6Q9Y2P4 619 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 SH3BP1Q9Y3L3 701 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.73□□□□□ -1.17
YBX3-209ENST00000540747 RAD54BQ9Y620 910 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms