RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 JAKMIP2Q96AA8 810 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 SPACA7Q96KW9 195 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 IPO9Q96P70 1041 aaKnown RBP10.94□□□□□ -0.66
CDCA3-208ENST00000540683 SMOQ99835 787 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 ARHGEF4Q9NR80 690 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 SPHK2Q9NRA0 654 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 NAGPAQ9UK23 515 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 MMP17Q9ULZ9 603 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 NME7Q9Y5B8 376 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 A0A0A0MRY4 1105 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 OTOL1A6NHN0 477 aaPredicted RBP10.93□□□□□ -0.66
CDCA3-208ENST00000540683 KAT7O95251 611 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 CYBBP04839 570 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 CYP17A1P05093 508 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 PAEPP09466 180 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 SETSIPP0DME0 302 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 VDRP11473 427 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 CACNA2D1P54289 1103 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 BST2Q10589 180 aaKnown RBP10.93□□□□□ -0.66
CDCA3-208ENST00000540683 PAK1Q13153 545 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 GAS6Q14393 721 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 CSRP2Q16527 193 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 ANO4Q32M45 955 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 C10orf120Q5SQS8 335 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 HEATR6Q6AI08 1181 aaKnown RBP10.93□□□□□ -0.66
CDCA3-208ENST00000540683 DGLUCYQ7Z3D6 616 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 SMYD4Q8IYR2 804 aaPredicted RBP10.93□□□□□ -0.66
CDCA3-208ENST00000540683 ZNF557Q8N988 423 aaPredicted RBP10.93□□□□□ -0.66
CDCA3-208ENST00000540683 C12orf50Q8NA57 414 aaPredicted RBP10.93□□□□□ -0.66
CDCA3-208ENST00000540683 NETO1Q8TDF5 533 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 SLC35C1Q96A29 364 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 CHFRQ96EP1 664 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 RTKNQ9BST9 563 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 IRX2Q9BZI1 471 aaPredicted RBP10.93□□□□□ -0.66
CDCA3-208ENST00000540683 LINC00597Q9H2U6 94 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 CCSER2Q9H7U1 834 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 LRRC4Q9HBW1 653 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 APOBEC3GQ9HC16 384 aaKnown RBP10.93□□□□□ -0.66
CDCA3-208ENST00000540683 DACH1Q9UI36 760 aa10.93□□□□□ -0.66
CDCA3-208ENST00000540683 TBC1D3BA6NDS4 549 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 XPO1O14980 1071 aaKnown RBP10.92□□□□□ -0.66
CDCA3-208ENST00000540683 SART1O43290 800 aaKnown RBP10.92□□□□□ -0.66
CDCA3-208ENST00000540683 MED7O43513 233 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 RARGP13631 454 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 ANP32AP39687 249 aaKnown RBP10.92□□□□□ -0.66
CDCA3-208ENST00000540683 OPRD1P41143 372 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 FMO5P49326 533 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 ZNF132P52740 706 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 SNX16P57768 344 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 ZNF394Q53GI3 561 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 SPDYCQ5MJ68 293 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 PPP1R26Q5T8A7 1209 aaPredicted RBP10.92□□□□□ -0.66
CDCA3-208ENST00000540683 RHBDF2Q6PJF5 856 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 ENOSF1Q7L5Y1 443 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 SIX6OS1Q8N1H7 587 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 ZMIZ2Q8NF64 920 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 USP33Q8TEY7 942 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 WHAMMQ8TF30 809 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 RNF139Q8WU17 664 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 UCMAQ8WVF2 138 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 ZC3H10Q96K80 434 aaKnown RBP10.92□□□□□ -0.66
CDCA3-208ENST00000540683 TMEM30AQ9NV96 361 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.92□□□□□ -0.66
CDCA3-208ENST00000540683 CHMP5Q9NZZ3 219 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 HMGXB4Q9UGU5 601 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.92□□□□□ -0.66
CDCA3-208ENST00000540683 USP3Q9Y6I4 520 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 COL4A3Q01955 1670 aa10.92□□□□□ -0.66
CDCA3-208ENST00000540683 MYO16Q9Y6X6 1858 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 CYP26A1O43174 497 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 HRO43593 1189 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 ZBED1O96006 694 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 CD19P15391 556 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 HARS2P49590 506 aaKnown RBP10.91□□□□□ -0.66
CDCA3-208ENST00000540683 RAD23BP54727 409 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 MARSP56192 900 aaKnown RBP10.91□□□□□ -0.66
CDCA3-208ENST00000540683 GCNT1Q02742 428 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 ORC1Q13415 861 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 MORC3Q14149 939 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 CRY1Q16526 586 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 MEA1Q16626 185 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 C2orf27AQ580R0 203 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 LY6G5CQ5SRR4 150 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 GRAMD4Q6IC98 578 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 RABEPKQ7Z6M1 372 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 FAM114A1Q8IWE2 563 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 SCML4Q8N228 414 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 PPM1KQ8N3J5 372 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 FAM160A2Q8N612 972 aaPredicted RBP10.91□□□□□ -0.66
CDCA3-208ENST00000540683 SLC4A11Q8NBS3 891 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 NELFBQ8WX92 580 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 IRGQQ8WZA9 623 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 PLD4Q96BZ4 506 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 CHAMP1Q96JM3 812 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 ZFRQ96KR1 1074 aaKnown RBP10.91□□□□□ -0.66
CDCA3-208ENST00000540683 CNOT6LQ96LI5 555 aaKnown RBP10.91□□□□□ -0.66
CDCA3-208ENST00000540683 BBS2Q9BXC9 721 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 KLF16Q9BXK1 252 aaPredicted RBP10.91□□□□□ -0.66
CDCA3-208ENST00000540683 CNGB3Q9NQW8 809 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 VPS45Q9NRW7 570 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms