RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 TRIM49D1C9J1S8 452 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 CYB561D2O14569 222 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 SPTLC1O15269 473 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 RPSAP08865 295 aaKnown RBP17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 ALDH3A1P30838 453 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 TAF6P49848 677 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 KCNJ2P63252 427 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 DCAF4L1Q3SXM0 396 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 PIGZQ86VD9 579 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 SHCBP1Q8NEM2 672 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 PCDH19Q8TAB3 1148 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 SLC7A14Q8TBB6 771 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 CCT6BQ92526 530 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 TMEM237Q96Q45 408 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 TBCBQ99426 244 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 TMEM109Q9BVC6 243 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 UBN1Q9NPG3 1134 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 TARSP26639 723 aaKnown RBP17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 SNX16P57768 344 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 CCDC185Q8N715 623 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 PTPN18Q99952 460 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 APOL2Q9BQE5 337 aa17.75■□□□□ 0.43
EPB41L3-204ENST00000540638 RRN3P2A6NIE6 340 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 IGF2BP3O00425 579 aaKnown RBP eCLIP17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 FGFR1P11362 822 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 CDH5P33151 784 aaPredicted RBP17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 MLH1P40692 756 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 SNX17Q15036 470 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 SNCBQ16143 134 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 FYB2Q5VWT5 728 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 C6orf89Q6UWU4 347 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 KDELC2Q7Z4H8 507 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 MAML1Q92585 1016 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 PGLYRP2Q96PD5 576 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 TXNDC16Q9P2K2 825 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 CLUHO75153 1309 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 RLFQ13129 1914 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 DARSP14868 501 aaKnown RBP17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 KLHL38Q2WGJ6 581 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 LDLRAD1Q5T700 205 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 ZNF354CQ86Y25 554 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 SGSM3Q96HU1 749 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 ETNK2Q9NVF9 386 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 CITO14578 2027 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 TCRBV9S1A1TA0A576 114 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 POMCP01189 267 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 STIP1P31948 543 aaKnown RBP17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 SOX4Q06945 474 aaPredicted RBP17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 GPATCH11Q8N954 259 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 CMASQ8NFW8 434 aaPredicted RBP17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 MAGEB18Q96M61 343 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 PCMTD2Q9NV79 361 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 NUDT5Q9UKK9 219 aa17.74■□□□□ 0.43
EPB41L3-204ENST00000540638 C3orf70A6NLC5 250 aaPredicted RBP17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 COPEO14579 308 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 XPOTO43592 962 aaKnown RBP17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 UGT1A9O60656 530 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 NEBLO76041 1014 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 FSBPO95073 299 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 TAC1P20366 129 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 PSEN2P49810 448 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 IQSEC1Q6DN90 963 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 PID1Q7Z2X4 250 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 PRPF39Q86UA1 669 aaKnown RBP17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 NIPA2Q8N8Q9 360 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 DNAAF3Q8N9W5 541 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 MS4A4AQ96JQ5 239 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 UGT1A7Q9HAW7 530 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 UGT1A10Q9HAW8 530 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 UGT1A8Q9HAW9 530 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 UBP1Q9NZI7 540 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 C2orf71A6NGG8 1288 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 ABCG1P45844 678 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 AFF1P51825 1210 aaKnown RBP17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 CACNB2Q08289 660 aaPredicted RBP17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 ZNF410Q86VK4 478 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 PARP9Q8IXQ6 854 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 LRRC37BQ96QE4 947 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 SLC17A6Q9P2U8 582 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 BRCA2P51587 3418 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 IQANK1A0A1B0GTG1 560 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 SRGAP2BP0DMP2 458 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 HDAC4P56524 1084 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 BST2Q10589 180 aaKnown RBP17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 MAMDC4Q6UXC1 1216 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 LRRC6Q86X45 466 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 UNC5BQ8IZJ1 945 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 FUKQ8N0W3 1084 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 FITM2Q8N6M3 262 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 PDCD7Q8N8D1 485 aaKnown RBP17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 USP33Q8TEY7 942 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 ZNF560Q96MR9 790 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 PAK5Q9P286 719 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 RABGEF1Q9UJ41 708 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 HAO1Q9UJM8 370 aa17.73■□□□□ 0.43
EPB41L3-204ENST00000540638 NRCAMQ92823 1304 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 EIF4E1BA6NMX2 242 aaKnown RBP17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 NCAM1P13591 858 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 BCAT1P54687 386 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms