RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 BBS12Q6ZW61 710 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 MFSD14AQ96MC6 490 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 DNAJB4Q9UDY4 337 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 FBXO40Q9UH90 709 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 SPATA31A5Q5VU36 1347 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 SPATA31A7Q8IWB4 1347 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 UBAP1LF5GYI3 381 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 POLRMTO00411 1230 aaKnown RBP13.45□□□□□ -0.26
DNMT1-203ENST00000540357 ANGPT2O15123 496 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 TIMM44O43615 452 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 KDM1AO60341 852 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 TAL1P17542 331 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-203ENST00000540357 TMED10P49755 219 aaKnown RBP13.45□□□□□ -0.26
DNMT1-203ENST00000540357 RBP5P82980 135 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 ATP13A4Q4VNC1 1196 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 ELMO3Q96BJ8 720 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 FAR2Q96K12 515 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 MTMR12Q9C0I1 747 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 NMUR2Q9GZQ4 415 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 RPAP3Q9H6T3 665 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-203ENST00000540357 RGS7P49802 495 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 PLOD1Q02809 727 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-203ENST00000540357 SPRED3Q2MJR0 410 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 RFWD3Q6PCD5 774 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 ACER1Q8TDN7 264 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 NT5C1AQ9BXI3 368 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 HOXC10Q9NYD6 342 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 OGTO15294 1046 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 PMM2O15305 246 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 GRAP2O75791 330 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 NR1H2P55055 460 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 GABPAQ06546 454 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 CMPK2Q5EBM0 449 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 HELQQ8TDG4 1101 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 CYGBQ8WWM9 190 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 NKD2Q969F2 451 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-203ENST00000540357 HACD3Q9P035 362 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 A0A0B4J269 797 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 MPOP05164 745 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 VDRP11473 427 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 MGAT5Q09328 741 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 PTK2BQ14289 1009 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 RNASEH2BQ5TBB1 312 aaKnown RBP13.44□□□□□ -0.26
DNMT1-203ENST00000540357 PLEKHA7Q6IQ23 1121 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 RBM15BQ8NDT2 890 aaKnown RBP13.44□□□□□ -0.26
DNMT1-203ENST00000540357 TMEM161BQ8NDZ6 487 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 TNIP2Q8NFZ5 429 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 SEMA4DQ92854 862 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 ZNF669Q96BR6 464 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-203ENST00000540357 GRIP2Q9C0E4 1043 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 CLIC5Q9NZA1 410 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 PRKAG3Q9UGI9 489 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 EFR3BQ9Y2G0 817 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-203ENST00000540357 E2F8A0AVK6 867 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 GOLGA8CPA6NN73 597 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 KCNA4P22459 653 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 ACAT1P24752 427 aaKnown RBP13.44□□□□□ -0.26
DNMT1-203ENST00000540357 SERPINB10P48595 397 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 ZCCHC23Q6ZST2 131 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 DENND5BQ6ZUT9 1274 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 EMC1Q8N766 993 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 BEST2Q8NFU1 509 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 UBA3Q8TBC4 463 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 SLC44A1Q8WWI5 657 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 FSD1LQ9BXM9 530 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 KIAA1257Q9ULG3 409 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 RPS6KL1Q9Y6S9 549 aa13.44□□□□□ -0.26
DNMT1-203ENST00000540357 TCRBV9S1A1TA0A576 114 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 CCNG1P51959 295 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 PRKAA2P54646 552 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 FOLH1Q04609 750 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 ACSBG2Q5FVE4 666 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 ANGEL2Q5VTE6 544 aaKnown RBP13.43□□□□□ -0.26
DNMT1-203ENST00000540357 ZNF786Q8N393 782 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 C7orf43Q8WVR3 580 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 RMND5BQ96G75 393 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-203ENST00000540357 TBCBQ99426 244 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 VTI1BQ9UEU0 232 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 MYRFQ9Y2G1 1151 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 ME2P23368 584 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 HMOX2P30519 316 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 MYL6P60660 151 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 KCTD2Q14681 263 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 SLC5A9Q2M3M2 681 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 RNF217Q8TC41 542 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 ACMSDQ8TDX5 336 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 UCMAQ8WVF2 138 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 WDR60Q8WVS4 1066 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 PTPRN2Q92932 1015 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 IDI2Q9BXS1 227 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 SNX13Q9Y5W8 968 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 SIGLEC16A6NMB1 481 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 CALCAP01258 141 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 UBAP2LQ14157 1087 aaKnown RBP13.43□□□□□ -0.26
DNMT1-203ENST00000540357 GRTP1Q5TC63 336 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 IER5Q5VY09 327 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 RBM44Q6ZP01 1051 aaKnown RBP13.43□□□□□ -0.26
DNMT1-203ENST00000540357 TSHZ1Q6ZSZ6 1077 aa13.43□□□□□ -0.26
DNMT1-203ENST00000540357 MON1BQ7L1V2 547 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms