RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 PGAP3Q96FM1 320 aaPredicted RBP17.88■□□□□ 0.45
LTBR-207ENST00000539925 NPY6RQ99463 290 aa17.88■□□□□ 0.45
LTBR-207ENST00000539925 PKMYT1Q99640 499 aa17.88■□□□□ 0.45
LTBR-207ENST00000539925 RTP3Q9BQQ7 232 aa17.88■□□□□ 0.45
LTBR-207ENST00000539925 OXCT2Q9BYC2 517 aaPredicted RBP17.88■□□□□ 0.45
LTBR-207ENST00000539925 TBC1D13Q9NVG8 400 aa17.88■□□□□ 0.45
LTBR-207ENST00000539925 CACNG4Q9UBN1 327 aa17.88■□□□□ 0.45
LTBR-207ENST00000539925 SHOC2Q9UQ13 582 aa17.88■□□□□ 0.45
LTBR-207ENST00000539925 H0YGN5 161 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 ENPP3O14638 875 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 DNALI1O14645 258 aaPredicted RBP17.87■□□□□ 0.45
LTBR-207ENST00000539925 CAPN9O14815 690 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 OAZ2O95190 189 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 ZBED1O96006 694 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 SULT1E1P49888 294 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 ELAVL2Q12926 359 aaKnown RBP17.87■□□□□ 0.45
LTBR-207ENST00000539925 DCAF6Q58WW2 860 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 CEP85LQ5SZL2 805 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 IZUMO3Q5VZ72 239 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 SLC9A4Q6AI14 798 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 HIBCHQ6NVY1 386 aaPredicted RBP17.87■□□□□ 0.45
LTBR-207ENST00000539925 ANKRD33Q7Z3H0 272 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 BNIPLQ7Z465 357 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 CLEC4CQ8WTT0 213 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 TOX2Q96NM4 488 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 TMEM109Q9BVC6 243 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 ULBP1Q9BZM6 244 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 ADAM21Q9UKJ8 722 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 LRFN2Q9ULH4 789 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 TPX2Q9ULW0 747 aaKnown RBP17.87■□□□□ 0.45
LTBR-207ENST00000539925 AP4E1Q9UPM8 1137 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 NFS1Q9Y697 457 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 BEST1O76090 585 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 CD48P09326 243 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 IBSPP21815 317 aaPredicted RBP17.87■□□□□ 0.45
LTBR-207ENST00000539925 ARL4AP40617 200 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 BCAR1P56945 870 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 DYNLT1P63172 113 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 ROR1Q01973 937 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 XRCC4Q13426 336 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 NFE2Q16621 373 aaPredicted RBP17.87■□□□□ 0.45
LTBR-207ENST00000539925 GLIPR1L2Q4G1C9 344 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 ANKRD20A8PQ5CZ79 823 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 AGBL2Q5U5Z8 902 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 PM20D1Q6GTS8 502 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 ZCCHC9Q8N567 271 aaKnown RBP17.87■□□□□ 0.45
LTBR-207ENST00000539925 FUBP3Q96I24 572 aaKnown RBP eCLIP17.87■□□□□ 0.45
LTBR-207ENST00000539925 DEFB118Q96PH6 123 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 COLEC11Q9BWP8 271 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 RNF208Q9H0X6 261 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 STMN4Q9H169 189 aaPredicted RBP17.87■□□□□ 0.45
LTBR-207ENST00000539925 FAM204AQ9H8W3 233 aa17.87■□□□□ 0.45
LTBR-207ENST00000539925 DCDC2CA8MYV0 355 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 NBNO60934 754 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 LTFP02788 710 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 RBP3P10745 1247 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 CCL5P13501 91 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 ACTN2P35609 894 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 P3H1Q32P28 736 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 C1orf53Q5VUE5 145 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 SPATA2LQ8IUW3 424 aaPredicted RBP17.86■□□□□ 0.45
LTBR-207ENST00000539925 ARFGAP2Q8N6H7 521 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 DBF4BQ8NFT6 615 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 NTAN1Q96AB6 310 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 ATP6V1G3Q96LB4 118 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 TMEM175Q9BSA9 504 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 ROPN1BQ9BZX4 212 aaPredicted RBP17.86■□□□□ 0.45
LTBR-207ENST00000539925 ROPN1Q9HAT0 212 aaPredicted RBP17.86■□□□□ 0.45
LTBR-207ENST00000539925 TMBIM4Q9HC24 238 aa17.86■□□□□ 0.45
LTBR-207ENST00000539925 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.85■□□□□ 0.45
LTBR-207ENST00000539925 HHLA1C9JL84 531 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 H3BRJ5 948 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 IGFBP6P24592 240 aaPredicted RBP17.85■□□□□ 0.45
LTBR-207ENST00000539925 L1CAMP32004 1257 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 OR1G1P47890 313 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 DEUP1Q05D60 604 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 ZNF844Q08AG5 666 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 SMARCB1Q12824 385 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 GPS1Q13098 491 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 TRIP13Q15645 432 aaPredicted RBP17.85■□□□□ 0.45
LTBR-207ENST00000539925 PLD5Q8N7P1 536 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 ZMIZ2Q8NF64 920 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 RIN2Q8WYP3 895 aaPredicted RBP17.85■□□□□ 0.45
LTBR-207ENST00000539925 TTC25Q96NG3 672 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 TMEM121Q9BTD3 319 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 DHX35Q9H5Z1 703 aaKnown RBP17.85■□□□□ 0.45
LTBR-207ENST00000539925 FZD10Q9ULW2 581 aa17.85■□□□□ 0.45
LTBR-207ENST00000539925 SF3B1O75533 1304 aaKnown RBP eCLIP17.84■□□□□ 0.45
LTBR-207ENST00000539925 OR6C75A6NL08 312 aa17.84■□□□□ 0.45
LTBR-207ENST00000539925 TADA2AO75478 443 aa17.84■□□□□ 0.45
LTBR-207ENST00000539925 DDHD2O94830 711 aa17.84■□□□□ 0.45
LTBR-207ENST00000539925 CXCL10P02778 98 aa17.84■□□□□ 0.45
LTBR-207ENST00000539925 IL4RP24394 825 aa17.84■□□□□ 0.45
LTBR-207ENST00000539925 ARL13BQ3SXY8 428 aa17.84■□□□□ 0.45
LTBR-207ENST00000539925 PAN2Q504Q3 1202 aaKnown RBP17.84■□□□□ 0.45
LTBR-207ENST00000539925 EFHC2Q5JST6 749 aa17.84■□□□□ 0.45
LTBR-207ENST00000539925 EMC10Q5UCC4 262 aa17.84■□□□□ 0.45
LTBR-207ENST00000539925 VSTM1Q6UX27 236 aa17.84■□□□□ 0.45
LTBR-207ENST00000539925 ZNF280BQ86YH2 543 aa17.84■□□□□ 0.45
LTBR-207ENST00000539925 CDKL3Q8IVW4 592 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms