RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ZC3H18Q86VM9 953 aaKnown RBP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 GSDMBQ8TAX9 411 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 TMEM176AQ96HP8 235 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 WNK4Q96J92 1243 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 CCDC106Q9BWC9 280 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 VCX3BQ9H321 246 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 C12orf65Q9H3J6 166 aaKnown RBP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 C10orf88Q9H8K7 445 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 PTPRHQ9HD43 1115 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 PPARGC1AQ9UBK2 798 aaKnown RBP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 ZNF112Q9UJU3 913 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 TELO2Q9Y4R8 837 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 FAM159BA6NKW6 160 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 ENO4A6NNW6 628 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 ACKR2O00590 384 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 APOL1O14791 398 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 BPGMP07738 259 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 ANPEPP15144 967 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 TPSB2P20231 275 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 KCNA3P22001 575 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 GPD2P43304 727 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 ZNF280AP59817 542 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 RPL26P61254 145 aaKnown RBP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 XIAPP98170 497 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 DSG1Q02413 1049 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 DGKZQ13574 1117 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 TPSAB1Q15661 275 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 AP1ARQ63HQ0 302 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 CWF19L1Q69YN2 538 aaKnown RBP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 ZBTB33Q86T24 672 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 ARID3BQ8IVW6 561 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 EMC1Q8N766 993 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 RBM15BQ8NDT2 890 aaKnown RBP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 ACAP3Q96P50 834 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 XAB2Q9HCS7 855 aaKnown RBP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 PICK1Q9NRD5 415 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 ZNF277Q9NRM2 450 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.76□□□□□ -0.21
UBE3B-209ENST00000539584 NDE1Q9NXR1 346 aa13.76□□□□□ -0.21
UBE3B-209ENST00000539584 C2CD4BA6NLJ0 364 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 DPYSL4O14531 572 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 CILPO75339 1184 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 MICAL2O94851 1124 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 FARP2O94887 1054 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-209ENST00000539584 ZBED1O96006 694 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 ZFXP17010 805 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-209ENST00000539584 SNX16P57768 344 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 MRPS5P82675 430 aaKnown RBP13.75□□□□□ -0.21
UBE3B-209ENST00000539584 STX3Q13277 289 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 CHI3L2Q15782 390 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 FAM102AQ5T9C2 384 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-209ENST00000539584 SLC9A4Q6AI14 798 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 SCARA5Q6ZMJ2 495 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 CATSPERGQ6ZRH7 1159 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 CDHR3Q6ZTQ4 885 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 TTC7BQ86TV6 843 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 ALYREFQ86V81 257 aaKnown RBP13.75□□□□□ -0.21
UBE3B-209ENST00000539584 CDKL3Q8IVW4 592 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-209ENST00000539584 ULK2Q8IYT8 1036 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 PLD5Q8N7P1 536 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.75□□□□□ -0.21
UBE3B-209ENST00000539584 SEPT1Q8WYJ6 367 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 ZNF670Q9BS34 389 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 KRT82Q9NSB4 513 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 ETNK2Q9NVF9 386 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 NXF1Q9UBU9 619 aaKnown RBP13.75□□□□□ -0.21
UBE3B-209ENST00000539584 SOX13Q9UN79 622 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 SSX2IPQ9Y2D8 614 aa13.75□□□□□ -0.21
UBE3B-209ENST00000539584 HBS1LQ9Y450 684 aaKnown RBP13.75□□□□□ -0.21
UBE3B-209ENST00000539584 IGKV6-21A0A0C4DH24 114 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 SLC15A5A6NIM6 579 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 SPDYE5A6NIY4 337 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 KCNN4O15554 427 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 PIAS1O75925 651 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 ENO1P06733 434 aaKnown RBP13.74□□□□□ -0.21
UBE3B-209ENST00000539584 RPS12P25398 132 aaKnown RBP13.74□□□□□ -0.21
UBE3B-209ENST00000539584 CACNA2D1P54289 1103 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 AQP5P55064 265 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 BCAR1P56945 870 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 IRX4P78413 519 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 CXCL9Q07325 125 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 LAMTOR4Q0VGL1 99 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 NAB1Q13506 487 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 KRT81Q14533 505 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 KYAT1Q16773 422 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 PRPF39Q86UA1 669 aaKnown RBP13.74□□□□□ -0.21
UBE3B-209ENST00000539584 CAND1Q86VP6 1230 aaKnown RBP13.74□□□□□ -0.21
UBE3B-209ENST00000539584 CCNJLQ8IV13 435 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 ZNF526Q8TF50 670 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-209ENST00000539584 JADE3Q92613 823 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 ATP2A3Q93084 1043 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 PPP2R3CQ969Q6 453 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 CFAP36Q96G28 342 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 PCYT2Q99447 389 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 EBNA1BP2Q99848 306 aaKnown RBP13.74□□□□□ -0.21
UBE3B-209ENST00000539584 ASCC2Q9H1I8 757 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-209ENST00000539584 FZD8Q9H461 694 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 RPF1Q9H9Y2 349 aaKnown RBP13.74□□□□□ -0.21
UBE3B-209ENST00000539584 FER1L6Q2WGJ9 1857 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms