RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 SDCBP2Q9H190 292 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 C1orf21Q9H246 121 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 AS3MTQ9HBK9 375 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 GPAMQ9HCL2 828 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 C2CD2Q9Y426 696 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 WASF2Q9Y6W5 498 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 SSC5DA1L4H1 1573 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 KAT6AQ92794 2004 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 BCLAF3A2AJT9 711 aaKnown RBP10.04□□□□□ -0.8
CDH13-204ENST00000539548 MAP3K13O43283 966 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 CIB2O75838 187 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 MICAL2O94851 1124 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 APOEP02649 317 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 GPD1P21695 349 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 PROZP22891 400 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 RAP1GAPP47736 663 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 CPA2P48052 419 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 STAT5BP51692 787 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 CACNA2D1P54289 1103 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 PTPN11Q06124 597 aaPredicted RBP10.04□□□□□ -0.8
CDH13-204ENST00000539548 LAMTOR4Q0VGL1 99 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 WASHC5Q12768 1159 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 PDK2Q15119 407 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 CHI3L2Q15782 390 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 SYCP2LQ5T4T6 812 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 RNF220Q5VTB9 566 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 CWF19L1Q69YN2 538 aaKnown RBP10.04□□□□□ -0.8
CDH13-204ENST00000539548 CRLF3Q8IUI8 442 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 MAP7D3Q8IWC1 876 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 ZBTB8OSQ8IWT0 167 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 KBTBD2Q8IY47 623 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 GALNT15Q8N3T1 639 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 PLD5Q8N7P1 536 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 ZBTB10Q96DT7 871 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 PANX3Q96QZ0 392 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 PTPRHQ9HD43 1115 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 SMYD2Q9NRG4 433 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDH13-204ENST00000539548 PDP2Q9P2J9 529 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 SORCS3Q9UPU3 1222 aa10.04□□□□□ -0.8
CDH13-204ENST00000539548 SLC15A5A6NIM6 579 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 C2CD4BA6NLJ0 364 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 KCNN4O15554 427 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 BPGMP07738 259 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 SERPINA6P08185 405 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 SRGAP2CP0DJJ0 459 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 TGM2P21980 687 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 KCNA3P22001 575 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 GPD2P43304 727 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 AQP5P55064 265 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 CDH8P55286 799 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 AP2B1P63010 937 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 ROR2Q01974 943 aaKnown RBP10.03□□□□□ -0.8
CDH13-204ENST00000539548 MXD4Q14582 209 aaPredicted RBP10.03□□□□□ -0.8
CDH13-204ENST00000539548 DBN1Q16643 649 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 TMCO4Q5TGY1 634 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 C1orf228Q6PIY5 440 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 MPZL3Q6UWV2 235 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 C4orf22Q6V702 233 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 KYAT3Q6YP21 454 aaKnown RBP10.03□□□□□ -0.8
CDH13-204ENST00000539548 RIPOR1Q6ZS17 1223 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 TSHZ1Q6ZSZ6 1077 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 ARCQ7LC44 396 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 ULK2Q8IYT8 1036 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.03□□□□□ -0.8
CDH13-204ENST00000539548 SLC13A1Q9BZW2 595 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 ELOVL4Q9GZR5 314 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 KLC2Q9H0B6 622 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 ETNK2Q9NVF9 386 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 LOC285556D6RIA3 1793 aa10.03□□□□□ -0.8
CDH13-204ENST00000539548 SDR42E2A6NKP2 422 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 FAM159BA6NKW6 160 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 C19orf81C9J6K1 198 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 CYB561D2O14569 222 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 PRPSAP2O60256 369 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 UGT1A9O60656 530 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 CILPO75339 1184 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 FARP2O94887 1054 aaPredicted RBP10.02□□□□□ -0.8
CDH13-204ENST00000539548 IL18RAPO95256 599 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 HMGCRP04035 888 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 MYCNP04198 464 aaPredicted RBP10.02□□□□□ -0.8
CDH13-204ENST00000539548 IL4RP24394 825 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 YY1P25490 414 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 MAGEA3P43357 314 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 SERPINB9P50453 376 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 FSTL1Q12841 308 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 STX3Q13277 289 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 BOLA3Q53S33 107 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 STXBP5Q5T5C0 1151 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 FAM102AQ5T9C2 384 aaPredicted RBP10.02□□□□□ -0.8
CDH13-204ENST00000539548 SH3PXD2AQ5TCZ1 1133 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 UNC5AQ6ZN44 842 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 TIFABQ6ZNK6 161 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 CATSPERGQ6ZRH7 1159 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 ADGRG6Q86SQ4 1221 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 PHC3Q8NDX5 983 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 RXFP2Q8WXD0 754 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 USP6NLQ92738 828 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 TMEM176AQ96HP8 235 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 SIGLEC10Q96LC7 697 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms