RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SNX16P57768 344 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 ATP11AP98196 1134 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 PLCB3Q01970 1234 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 KLF1Q13351 362 aaPredicted RBP17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 SLC29A2Q14542 456 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 CCDC14Q49A88 953 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 COLGALT2Q8IYK4 626 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 URGCPQ8TCY9 931 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 SEPT8Q92599 483 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 CNPY3Q9BT09 278 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 CHST7Q9NS84 486 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 KRT82Q9NSB4 513 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 TMEM30AQ9NV96 361 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 ASNSD1Q9NWL6 643 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 R3HDM2Q9Y2K5 976 aaKnown RBP17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 CCDC189A1A4V9 331 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 LRRD1A4D1F6 860 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 SMIM23A6NLE4 172 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 CYP11A1P05108 521 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 CYP2C18P33260 490 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 IFI35P80217 286 aaPredicted RBP17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 HADHQ16836 314 aaKnown RBP17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 KAZNQ674X7 775 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 POLNQ7Z5Q5 900 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 METTL23Q86XA0 190 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 ZDHHC17Q8IUH5 632 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 ANKS4BQ8N8V4 417 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 MAGEC3Q8TD91 643 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 ATG4AQ8WYN0 398 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 SUSD3Q96L08 255 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 KCNK16Q96T55 309 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 PCDHB7Q9Y5E2 793 aa17.82■□□□□ 0.44
PCDHB17P-201ENST00000539533 PCSK1P29120 753 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 COILP38432 576 aaPredicted RBP17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 ACADSBP45954 432 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 OR1G1P47890 313 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 CACNA2D1P54289 1103 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 SLC8A3P57103 927 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 ADIGQ0VDE8 80 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 SNX1Q13596 522 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 ACAP1Q15027 740 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 RBM41Q96IZ5 413 aaKnown RBP17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 ZNF333Q96JL9 665 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 TMEM209Q96SK2 561 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 FAM118BQ9BPY3 351 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 RHOBTB2Q9BYZ6 727 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 CYLDQ9NQC7 956 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 DDX56Q9NY93 547 aaKnown RBP17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 PCYOX1Q9UHG3 505 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 USP18Q9UMW8 372 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 PRG3Q9Y2Y8 225 aaPredicted RBP17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 AGTP01019 485 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 FAM200BP0CF97 657 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 EZRP15311 586 aaKnown RBP17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 RPL21P46778 160 aaKnown RBP17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 NDUFV1P49821 464 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 E2F5Q15329 346 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 C6orf118Q5T5N4 469 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 SPOCD1Q6ZMY3 1216 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 PIGWQ7Z7B1 504 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 DEFB128Q7Z7B8 93 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 FAM35AQ86V20 835 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 CCDC105Q8IYK2 499 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 OR10T2Q8NGX3 314 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 PEBP4Q96S96 227 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 SMOQ99835 787 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 ACBD6Q9BR61 282 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 SEMA4AQ9H3S1 761 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 LRRC19Q9H756 370 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 KANSL3Q9P2N6 904 aa17.81■□□□□ 0.44
PCDHB17P-201ENST00000539533 TSC2P49815 1807 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 AP1G2O75843 785 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 TRUB2O95900 331 aaKnown RBP17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 KRT7P08729 469 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 TFE3P19532 575 aaPredicted RBP17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 GBP1P32455 592 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 ITIH4Q14624 930 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 UBAP2Q5T6F2 1119 aaKnown RBP17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 OVOS1Q6IE37 1185 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 SLC26A9Q7LBE3 791 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 LRRC34Q8IZ02 419 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 C12orf50Q8NA57 414 aaPredicted RBP17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 FAM193BQ96PV7 902 aaPredicted RBP17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 ELAC1Q9H777 363 aaKnown RBP17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 INTS9Q9NV88 658 aaKnown RBP17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 C3orf70A6NLC5 250 aaPredicted RBP17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 MGRN1O60291 552 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 CD48P09326 243 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 COL6A1P12109 1028 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 SDC4P31431 198 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 PCK1P35558 622 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 LRRTM3Q86VH5 581 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 ABI1Q8IZP0 508 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 ZMIZ2Q8NF64 920 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 MAIP1Q8WWC4 291 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 MYLPFQ96A32 169 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 CASD1Q96PB1 797 aa17.8■□□□□ 0.44
PCDHB17P-201ENST00000539533 NGRNQ9NPE2 291 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms