RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 RETREG3Q86VR2 466 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 CMTR2Q8IYT2 770 aaKnown RBP6.57□□□□□ -1.36
MDM2-225ENST00000539479 TXLNBQ8N3L3 684 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 MMGT1Q8N4V1 131 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 PRELID2Q8N945 189 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 SPATA4Q8NEY3 305 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 ACTRT1Q8TDG2 376 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 AUTS2Q8WXX7 1259 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 PIK3R5Q8WYR1 880 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 HERVK_113Q902F9 699 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 ANKRD7Q92527 254 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 HLA-CQ95604 372 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 SMARCD1Q96GM5 515 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 RNPC3Q96LT9 517 aaKnown RBP6.57□□□□□ -1.36
MDM2-225ENST00000539479 PGLYRP2Q96PD5 576 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 TBCBQ99426 244 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 NPY6RQ99463 290 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 CLSTN3Q9BQT9 956 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 DDX23Q9BUQ8 820 aaKnown RBP6.57□□□□□ -1.36
MDM2-225ENST00000539479 SELENOOQ9BVL4 669 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 HERC2P3Q9BVR0 1158 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 NMUR1Q9HB89 426 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 WDR6Q9NNW5 1121 aaKnown RBP6.57□□□□□ -1.36
MDM2-225ENST00000539479 ST7Q9NRC1 585 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 GPATCH2LQ9NWQ4 482 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 MTMR10Q9NXD2 777 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 IL37Q9NZH6 218 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 MTRRQ9UBK8 725 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 DSEQ9UL01 958 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 SCINQ9Y6U3 715 aa6.57□□□□□ -1.36
MDM2-225ENST00000539479 CHD9Q3L8U1 2897 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 SF3B1O75533 1304 aaKnown RBP eCLIP6.56□□□□□ -1.366e-7■■■■■ 32.6
MDM2-225ENST00000539479 GRXCR1A8MXD5 290 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 MIF4GDA9UHW6 222 aaKnown RBP6.56□□□□□ -1.36
MDM2-225ENST00000539479 FSCN2O14926 492 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 TP73O15350 636 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 PSTPIP1O43586 416 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 CEP104O60308 925 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 DAB1O75553 588 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 TRUB2O95900 331 aaKnown RBP6.56□□□□□ -1.36
MDM2-225ENST00000539479 IGLV3-25P01717 112 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 ALDH2P05091 517 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 USP17L7P0C7H9 530 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 CCNYL3P0C7X3 344 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 MYBL2P10244 700 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 PDGFRAP16234 1089 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 CAPN2P17655 700 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 ATF6P18850 670 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 GPD1P21695 349 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 PSMA2P25787 234 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 CDKN2BP42772 138 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 SLC1A1P43005 524 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 PTGIRP43119 386 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 PTPN9P43378 593 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 SLC5A3P53794 718 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 ROR1Q01973 937 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 DSG1Q02413 1049 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 FPGSQ05932 587 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 ITIH3Q06033 890 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 TUBB2AQ13885 445 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 CAMK1Q14012 370 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 IFI16Q16666 785 aaKnown RBP6.56□□□□□ -1.36
MDM2-225ENST00000539479 DDR2Q16832 855 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 SMTNL2Q2TAL5 461 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 CFAP221Q4G0U5 840 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 CTXN3Q4LDR2 81 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 TEX35Q5T0J7 233 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 LRRC38Q5VT99 294 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 PTCRAQ6ISU1 281 aaPredicted RBP6.56□□□□□ -1.36
MDM2-225ENST00000539479 SLC8B1Q6J4K2 584 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 PPP1R2P3Q6NXS1 205 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 ARCQ7LC44 396 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 ADAT2Q7Z6V5 191 aaKnown RBP6.56□□□□□ -1.36
MDM2-225ENST00000539479 CEP57Q86XR8 500 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 SLC13A5Q86YT5 568 aaPredicted RBP6.56□□□□□ -1.36
MDM2-225ENST00000539479 KATNAL2Q8IYT4 538 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 ABI1Q8IZP0 508 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 SYCE1Q8N0S2 351 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 DEFB106AQ8N104 65 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 SCML4Q8N228 414 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 TMEM199Q8N511 208 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 CCDC185Q8N715 623 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 MSANTD4Q8NCY6 345 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 CMASQ8NFW8 434 aaPredicted RBP6.56□□□□□ -1.36
MDM2-225ENST00000539479 FAM71BQ8TC56 605 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 GPR152Q8TDT2 470 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 CLP1Q92989 425 aaKnown RBP6.56□□□□□ -1.36
MDM2-225ENST00000539479 PBKQ96KB5 322 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 FAM193BQ96PV7 902 aaPredicted RBP6.56□□□□□ -1.36
MDM2-225ENST00000539479 SLITRK1Q96PX8 696 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 HINFPQ9BQA5 517 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 CNPY3Q9BT09 278 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 MED10Q9BTT4 135 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 TUBB2BQ9BVA1 445 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 COLEC11Q9BWP8 271 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 AP1M1Q9BXS5 423 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 MRPL9Q9BYD2 267 aaKnown RBP6.56□□□□□ -1.36
MDM2-225ENST00000539479 UBXN6Q9BZV1 441 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 CARD9Q9H257 536 aa6.56□□□□□ -1.36
MDM2-225ENST00000539479 PLEKHA4Q9H4M7 779 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms