RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 DSG1Q02413 1049 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 GPR17Q13304 367 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 COL19A1Q14993 1142 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 RPS6KA1Q15418 735 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 DDR2Q16832 855 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 ATP13A4Q4VNC1 1196 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 DCAF12L1Q5VU92 463 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 TXNRD3NBQ6F5E7 133 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 AADACL2Q6P093 401 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 CC2D1AQ6P1N0 951 aaPredicted RBP9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 DCUN1D2Q6PH85 259 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 ANKS3Q6ZW76 656 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 SCN4BQ8IWT1 228 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 SYCE1Q8N0S2 351 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 VPS52Q8N1B4 723 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 MSANTD4Q8NCY6 345 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 SCAMP5Q8TAC9 235 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 GPR152Q8TDT2 470 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 ALG3Q92685 438 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 CLP1Q92989 425 aaKnown RBP9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 MRPL38Q96DV4 380 aaKnown RBP9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 TMEM169Q96HH4 297 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 HES6Q96HZ4 224 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 CAPZA3Q96KX2 299 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 OSBPL9Q96SU4 736 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 C17orf80Q9BSJ5 609 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 CARD6Q9BX69 1037 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 UBXN6Q9BZV1 441 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 L2HGDHQ9H9P8 463 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 LRRC4Q9HBW1 653 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 CYLDQ9NQC7 956 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 CDC23Q9UJX2 597 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 PCDHB5Q9Y5E4 795 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 BACE2Q9Y5Z0 518 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 MRFAP1Q9Y605 127 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 SAR1BQ9Y6B6 198 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 MYO7AQ13402 2215 aa9.62□□□□□ -0.87
RTN4IP1-204ENST00000539449 EP300Q09472 2414 aaPredicted RBP9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 C2CD4BA6NLJ0 364 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 YJEFN3A6XGL0 299 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 E7ENQ6 273 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 FYNP06241 537 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 USP17L7P0C7H9 530 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 HAPLN1P10915 354 aaPredicted RBP9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 GPD1P21695 349 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 DNAJB1P25685 340 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 PSMA2P25787 234 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 CTNNA2P26232 953 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 BMPR1AP36894 532 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 GRIK1P39086 918 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 DAOAP59103 153 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 ERVFC1P60507 584 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 USP46P62068 366 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 DUSP4Q13115 394 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 ZNF211Q13398 564 aaPredicted RBP9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 MAPRE1Q15691 268 aaKnown RBP9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 NFE2Q16621 373 aaPredicted RBP9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 C15orf59Q2T9L4 293 aaPredicted RBP9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 CCDC14Q49A88 953 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 TCEAL5Q5H9L2 206 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 OTUD1Q5VV17 481 aaPredicted RBP9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 SLC8B1Q6J4K2 584 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 C4orf50Q6ZRC1 276 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 SLC26A9Q7LBE3 791 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 ANKS1BQ7Z6G8 1248 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 CREG2Q8IUH2 290 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 DEFB106AQ8N104 65 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 COL26A1Q96A83 441 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 RMDN1Q96DB5 314 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 ZBP1Q9H171 429 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 DMAP1Q9NPF5 467 aaPredicted RBP9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 CLDND1Q9NY35 253 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 CALCOCO1Q9P1Z2 691 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 IP6K2Q9UHH9 426 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 PCDHB12Q9Y5F1 795 aa9.61□□□□□ -0.87
RTN4IP1-204ENST00000539449 MTCL1Q9Y4B5 1905 aaKnown RBP9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 DPYSL4O14531 572 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 KCNK3O14649 394 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 MBTPS2O43462 519 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 SPOPO43791 374 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 ABLIM3O94929 683 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 CSPG5O95196 566 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 PDGFRAP16234 1089 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 PRLRP16471 622 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 IL1R2P27930 398 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 MAN1A1P33908 653 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 CTNNB1P35222 781 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 GJC1P36383 396 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 LTBRP36941 435 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 MAGEA11P43364 429 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 NUBP1P53384 320 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 ATXN1P54253 815 aaKnown RBP9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 SIGLEC14Q08ET2 396 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 IFRD2Q12894 506 aaPredicted RBP9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 MTMR3Q13615 1198 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 COL9A2Q14055 689 aaPredicted RBP9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 CLUL1Q15846 466 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 CDO1Q16878 200 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 CFAP221Q4G0U5 840 aa9.6□□□□□ -0.87
RTN4IP1-204ENST00000539449 SYPL2Q5VXT5 272 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms