RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 LOC102723971A0A1B0GUV8 181 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.21□□□□□ -1.42
CCDC7-209ENST00000539197 PYCARD-AS1I3L0S3 204 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 AKAP10O43572 662 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 TUSC2O75896 110 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 NTSR1P30989 418 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 RAB27AP51159 221 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 SUMO3P55854 103 aaPredicted RBP6.21□□□□□ -1.42
CCDC7-209ENST00000539197 ERV3-1Q14264 604 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 NPY5RQ15761 445 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 LVRNQ6Q4G3 990 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 UBE2Q1Q7Z7E8 422 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 MPLKIPQ8TAP9 179 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 WIPF2Q8TF74 440 aaPredicted RBP6.21□□□□□ -1.42
CCDC7-209ENST00000539197 C22orf23Q9BZE7 217 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 SACM1LQ9NTJ5 587 aa6.21□□□□□ -1.42
CCDC7-209ENST00000539197 FYB1O15117 783 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 RASSF9O75901 435 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 PGDP52209 483 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 STK3Q13188 491 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 STIM1Q13586 685 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 C3orf38Q5JPI3 329 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 MAEAQ7L5Y9 396 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 CHPFQ8IZ52 775 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 C12orf76Q8N812 135 aaPredicted RBP6.2□□□□□ -1.42
CCDC7-209ENST00000539197 HIC2Q96JB3 615 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 STK31Q9BXU1 1019 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 HIPK2Q9H2X6 1198 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 ZBTB40Q9NUA8 1239 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 RIMKLBQ9ULI2 386 aa6.2□□□□□ -1.42
CCDC7-209ENST00000539197 TRIM43BA6NCK2 446 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 CCP110O43303 1012 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 SMAD6O43541 496 aaKnown RBP6.19□□□□□ -1.42
CCDC7-209ENST00000539197 PARP1P09874 1014 aaKnown RBP6.19□□□□□ -1.42
CCDC7-209ENST00000539197 TNFRSF1BP20333 461 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 TACR3P29371 465 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 CPA2P48052 419 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 GATMP50440 423 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 MTX1Q13505 466 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 ZNF750Q32MQ0 723 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 DAB2IPQ5VWQ8 1189 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 PELI3Q8N2H9 469 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 STAG1Q8WVM7 1258 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 TRIM43Q96BQ3 446 aaPredicted RBP6.19□□□□□ -1.42
CCDC7-209ENST00000539197 SUCLG2Q96I99 432 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 THOC3Q96J01 351 aaKnown RBP6.19□□□□□ -1.42
CCDC7-209ENST00000539197 MLXIPLQ9NP71 852 aa6.19□□□□□ -1.42
CCDC7-209ENST00000539197 MBD3L4A6NDZ8 208 aaPredicted RBP6.18□□□□□ -1.42
CCDC7-209ENST00000539197 MBD3L3A6NE82 208 aaPredicted RBP6.18□□□□□ -1.42
CCDC7-209ENST00000539197 PRAMEF2O60811 474 aa6.18□□□□□ -1.42
CCDC7-209ENST00000539197 PIAS2O75928 621 aa6.18□□□□□ -1.42
CCDC7-209ENST00000539197 CD19P15391 556 aa6.18□□□□□ -1.42
CCDC7-209ENST00000539197 GPC5P78333 572 aa6.18□□□□□ -1.42
CCDC7-209ENST00000539197 PFKFB3Q16875 520 aaPredicted RBP6.18□□□□□ -1.42
CCDC7-209ENST00000539197 APOA5Q6Q788 366 aa6.18□□□□□ -1.42
CCDC7-209ENST00000539197 MMP21Q8N119 569 aa6.18□□□□□ -1.42
CCDC7-209ENST00000539197 SCNM1Q9BWG6 230 aa6.18□□□□□ -1.42
CCDC7-209ENST00000539197 USP29Q9HBJ7 922 aa6.18□□□□□ -1.42
CCDC7-209ENST00000539197 NKX1-2Q9UD57 310 aaPredicted RBP6.18□□□□□ -1.42
CCDC7-209ENST00000539197 GTPBP1O00178 669 aaKnown RBP6.17□□□□□ -1.42
CCDC7-209ENST00000539197 RAB27BO00194 218 aa6.17□□□□□ -1.42
CCDC7-209ENST00000539197 RRHO14718 337 aa6.17□□□□□ -1.42
CCDC7-209ENST00000539197 CA12O43570 354 aa6.17□□□□□ -1.42
CCDC7-209ENST00000539197 KLRC1P26715 233 aa6.17□□□□□ -1.42
CCDC7-209ENST00000539197 KPNB1Q14974 876 aaKnown RBP6.17□□□□□ -1.42
CCDC7-209ENST00000539197 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.17□□□□□ -1.42
CCDC7-209ENST00000539197 ZNF549Q6P9A3 640 aa6.17□□□□□ -1.42
CCDC7-209ENST00000539197 USP49Q70CQ1 688 aa6.17□□□□□ -1.42
CCDC7-209ENST00000539197 PRR11Q96HE9 360 aaPredicted RBP6.17□□□□□ -1.42
CCDC7-209ENST00000539197 HDAC9Q9UKV0 1011 aa6.17□□□□□ -1.42
CCDC7-209ENST00000539197 A8MVJ9 347 aa6.16□□□□□ -1.42
CCDC7-209ENST00000539197 CD63P08962 238 aa6.16□□□□□ -1.42
CCDC7-209ENST00000539197 FGF2P09038 288 aa6.16□□□□□ -1.42
CCDC7-209ENST00000539197 BRAFP15056 766 aa6.16□□□□□ -1.42
CCDC7-209ENST00000539197 CDKN2AP42771 156 aaKnown RBP6.16□□□□□ -1.42
CCDC7-209ENST00000539197 ARHGEF7Q14155 803 aa6.16□□□□□ -1.42
CCDC7-209ENST00000539197 KCNAB1Q14722 419 aa6.16□□□□□ -1.42
CCDC7-209ENST00000539197 FAM110CQ1W6H9 321 aa6.16□□□□□ -1.42
CCDC7-209ENST00000539197 RBMXL3Q8N7X1 1067 aaKnown RBP6.16□□□□□ -1.42
CCDC7-209ENST00000539197 PNPLA1Q8N8W4 532 aa6.16□□□□□ -1.42
CCDC7-209ENST00000539197 TM2D2Q9BX73 214 aa6.16□□□□□ -1.42
CCDC7-209ENST00000539197 E2F8A0AVK6 867 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 CAPN8A6NHC0 703 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 C16orf96A6NNT2 1141 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 INPPL1O15357 1258 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 CTNND1O60716 968 aaKnown RBP6.15□□□□□ -1.42
CCDC7-209ENST00000539197 T-ENOLP0DO92 83 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 IL1R1P14778 569 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 ZKSCAN1P17029 563 aaPredicted RBP6.15□□□□□ -1.42
CCDC7-209ENST00000539197 ADRA1DP25100 572 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 YY1P25490 414 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 RPS16P62249 146 aaKnown RBP6.15□□□□□ -1.42
CCDC7-209ENST00000539197 CNN3Q15417 329 aaKnown RBP6.15□□□□□ -1.42
CCDC7-209ENST00000539197 ST3GAL2Q16842 350 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 ZNF793Q6ZN11 406 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 VPS50Q96JG6 964 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 ZNF668Q96K58 619 aaPredicted RBP6.15□□□□□ -1.42
CCDC7-209ENST00000539197 DHX36Q9H2U1 1008 aaKnown RBP6.15□□□□□ -1.42
CCDC7-209ENST00000539197 AS3MTQ9HBK9 375 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 ZNF112Q9UJU3 913 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms