RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 MYO1CO00159 1063 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 EYA2O00167 538 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 SYT5O00445 386 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 YY2O15391 372 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 MPPED1O15442 326 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 DKC1O60832 514 aaKnown RBP eCLIP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 PHF2O75151 1096 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 MOSPD3O75425 235 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 RASSF9O75901 435 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 TSPAN9O75954 239 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 ARIH2O95376 493 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 NTN1O95631 604 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 BAG2O95816 211 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 DNTTP04053 509 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 ITGA2BP08514 1039 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 HSPA1AP0DMV8 641 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 HSPA1BP0DMV9 641 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 CKBP12277 381 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 AKR1B1P15121 316 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 GSPT1P15170 499 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 TSHRP16473 764 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 CHMP24386 653 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 TKTP29401 623 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 PDIA3P30101 505 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 ABCD1P33897 745 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 TSPAN7P41732 249 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 GRIA3P42263 894 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 PIK3CAP42336 1068 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 LIFRP42702 1097 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 PAFAH1B1P43034 410 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 TNNT3P45378 269 aaPredicted RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 POLD2P49005 469 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 CCT4P50991 539 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 FXR1P51114 621 aaKnown RBP eCLIP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 MAP2K6P52564 334 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 AGFG1P52594 562 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 MANFP55145 182 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 SUMO3P55854 103 aaPredicted RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 TUBA4AP68366 448 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 UBE3AQ05086 875 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 NEXNQ0ZGT2 675 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 SLC10A2Q12908 348 aaPredicted RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 MALLQ13021 153 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 CHAF1BQ13112 559 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 PPP2R5CQ13362 524 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 CUL4AQ13619 759 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 IL10RAQ13651 578 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 WTAPQ15007 396 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 RPS6KA2Q15349 733 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 SF3B3Q15393 1217 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 ATP2B3Q16720 1220 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 TTC31Q49AM3 519 aaPredicted RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 GLIPR1L2Q4G1C9 344 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 PITRM1Q5JRX3 1037 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 KHDC1LQ5JSQ8 128 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 FBXO47Q5MNV8 452 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 ZNF626Q68DY1 528 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 SLC9A4Q6AI14 798 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 CYB5RLQ6IPT4 315 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 VWA1Q6PCB0 445 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 C16orf54Q6UWD8 224 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 FAM47EQ6ZV65 393 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 ZNF572Q7Z3I7 529 aaPredicted RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 HEATR3Q7Z4Q2 680 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 GALNT5Q7Z7M9 940 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 CHD1LQ86WJ1 897 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 VSIG1Q86XK7 387 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 LSMEM1Q8N8F7 131 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 ATP11CQ8NB49 1132 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 PCSK9Q8NBP7 692 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 CCDC191Q8NCU4 936 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 REPS2Q8NFH8 660 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 OR6B3Q8NGW1 331 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 MGARPQ8TDB4 240 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 SMCR8Q8TEV9 937 aaPredicted RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 ASB12Q8WXK4 309 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 CENPIQ92674 756 aaPredicted RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 DPF2Q92785 391 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 CUL5Q93034 780 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 CCDC47Q96A33 483 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 JAKMIP2Q96AA8 810 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 ZUFSPQ96AP4 578 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 HVCN1Q96D96 273 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 RRP36Q96EU6 259 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 CALML4Q96GE6 196 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 MAELQ96JY0 434 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 FAM167AQ96KS9 214 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 COG8Q96MW5 612 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 ZNF48Q96MX3 618 aaPredicted RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 YME1L1Q96TA2 773 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 PRPF18Q99633 342 aaKnown RBP1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 SLF1Q9BQI6 1058 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 MRI1Q9BV20 369 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 STK33Q9BYT3 514 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 MAGEB5Q9BZ81 275 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 C22orf23Q9BZE7 217 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 TRIM5Q9C035 493 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 BRD8Q9H0E9 1235 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 RETREG1Q9H6L5 497 aa1.96□□□□□ -2.1
NPIPB4-209ENST00000538859 SYNCQ9H7C4 482 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms