RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 SLC9A4Q6AI14 798 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 NPNTQ6UXI9 565 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 PCGF5Q86SE9 256 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 RELL1Q8IUW5 271 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 HASPINQ8TF76 798 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 LINC01599Q8WXQ3 324 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 NDRG1Q92597 394 aaKnown RBP21.26■□□□□ 0.99
DDX55-205ENST00000538744 MYLPFQ96A32 169 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 SUSD3Q96L08 255 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.26■□□□□ 0.99
DDX55-205ENST00000538744 STAP1Q9ULZ2 295 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 SHOC2Q9UQ13 582 aa21.26■□□□□ 0.99
DDX55-205ENST00000538744 L1CAMP32004 1257 aa21.25■□□□□ 0.99
DDX55-205ENST00000538744 ATXN1P54253 815 aaKnown RBP21.25■□□□□ 0.99
DDX55-205ENST00000538744 FAM189BP81408 668 aa21.25■□□□□ 0.99
DDX55-205ENST00000538744 DCAF6Q58WW2 860 aa21.25■□□□□ 0.99
DDX55-205ENST00000538744 PPP6R3Q5H9R7 873 aaPredicted RBP21.25■□□□□ 0.99
DDX55-205ENST00000538744 UBAP2Q5T6F2 1119 aaKnown RBP21.25■□□□□ 0.99
DDX55-205ENST00000538744 LRRC8DQ7L1W4 858 aa21.25■□□□□ 0.99
DDX55-205ENST00000538744 PQLC3Q8N755 202 aa21.25■□□□□ 0.99
DDX55-205ENST00000538744 PLD5Q8N7P1 536 aa21.25■□□□□ 0.99
DDX55-205ENST00000538744 URGCPQ8TCY9 931 aa21.25■□□□□ 0.99
DDX55-205ENST00000538744 SLC2A13Q96QE2 648 aa21.25■□□□□ 0.99
DDX55-205ENST00000538744 FTHL17Q9BXU8 183 aa21.25■□□□□ 0.99
DDX55-205ENST00000538744 ULBP1Q9BZM6 244 aa21.25■□□□□ 0.99
DDX55-205ENST00000538744 DHX35Q9H5Z1 703 aaKnown RBP21.25■□□□□ 0.99
DDX55-205ENST00000538744 CNGB3Q9NQW8 809 aa21.25■□□□□ 0.99
DDX55-205ENST00000538744 DNAJC17Q9NVM6 304 aaKnown RBP21.25■□□□□ 0.99
DDX55-205ENST00000538744 SAGE1Q9NXZ1 904 aa21.25■□□□□ 0.99
DDX55-205ENST00000538744 A6NNZ2 444 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 SHOX2O60902 331 aaPredicted RBP21.24■□□□□ 0.99
DDX55-205ENST00000538744 TTC4O95801 387 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 SELPP16109 830 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 CDR1P51861 262 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 GDF10P55107 478 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 BCAR1P56945 870 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 DAOAP59103 153 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 TUBB8Q3ZCM7 444 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 RAB41Q5JT25 222 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 RNASEH2BQ5TBB1 312 aaKnown RBP21.24■□□□□ 0.99
DDX55-205ENST00000538744 OVOS1Q6IE37 1185 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 FAM171BQ6P995 826 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 DARS2Q6PI48 645 aaKnown RBP21.24■□□□□ 0.99
DDX55-205ENST00000538744 C1orf228Q6PIY5 440 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 UNC45BQ8IWX7 931 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 THEM5Q8N1Q8 247 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 ARFGAP2Q8N6H7 521 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 ZMIZ2Q8NF64 920 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 PCDH19Q8TAB3 1148 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 NT5C3BQ969T7 300 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 PWWP2AQ96N64 755 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 NPY6RQ99463 290 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 CAPS2Q9BXY5 557 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 C10orf88Q9H8K7 445 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 POPDC2Q9HBU9 364 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 LRRC4CQ9HCJ2 640 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 DNAH12Q6ZR08 3092 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 CENPFP49454 3210 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 ACSL3O95573 720 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 TYMPP19971 482 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 CYP2F1P24903 491 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 YY1P25490 414 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 STIP1P31948 543 aaKnown RBP21.24■□□□□ 0.99
DDX55-205ENST00000538744 NOMO2Q5JPE7 1267 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 CLLU1OSQ5K130 101 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 C6orf118Q5T5N4 469 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 PSTKQ8IV42 348 aaKnown RBP21.24■□□□□ 0.99
DDX55-205ENST00000538744 CCDC185Q8N715 623 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 UHMK1Q8TAS1 419 aaKnown RBP21.24■□□□□ 0.99
DDX55-205ENST00000538744 PGM2Q96G03 612 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 RBM15Q96T37 977 aaKnown RBP eCLIP21.24■□□□□ 0.991e-7■■□□□ 13.4
DDX55-205ENST00000538744 KCNK16Q96T55 309 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 CSNK1G1Q9HCP0 422 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 NINJ2Q9NZG7 142 aa21.24■□□□□ 0.99
DDX55-205ENST00000538744 NOVA2Q9UNW9 492 aaKnown RBP21.24■□□□□ 0.99
DDX55-205ENST00000538744 H7C0C1 242 aa21.23■□□□□ 0.99
DDX55-205ENST00000538744 ZFXP17010 805 aaPredicted RBP21.23■□□□□ 0.99
DDX55-205ENST00000538744 RPL22P35268 128 aaKnown RBP21.23■□□□□ 0.99
DDX55-205ENST00000538744 ATP5OP48047 213 aa21.23■□□□□ 0.99
DDX55-205ENST00000538744 CACNA2D1P54289 1103 aa21.23■□□□□ 0.99
DDX55-205ENST00000538744 BFSP2Q13515 415 aa21.23■□□□□ 0.99
DDX55-205ENST00000538744 MAPRE1Q15691 268 aaKnown RBP21.23■□□□□ 0.99
DDX55-205ENST00000538744 BNIPLQ7Z465 357 aa21.23■□□□□ 0.99
DDX55-205ENST00000538744 FAM71DQ8N9W8 422 aa21.23■□□□□ 0.99
DDX55-205ENST00000538744 KCTD15Q96SI1 283 aaPredicted RBP21.23■□□□□ 0.99
DDX55-205ENST00000538744 ROPN1BQ9BZX4 212 aaPredicted RBP21.23■□□□□ 0.99
DDX55-205ENST00000538744 NRDE2Q9H7Z3 1164 aa21.23■□□□□ 0.99
DDX55-205ENST00000538744 ROPN1Q9HAT0 212 aaPredicted RBP21.23■□□□□ 0.99
DDX55-205ENST00000538744 TMEM30AQ9NV96 361 aa21.23■□□□□ 0.99
DDX55-205ENST00000538744 PCDHB8Q9UN66 801 aa21.23■□□□□ 0.99
DDX55-205ENST00000538744 TRIM17Q9Y577 477 aa21.23■□□□□ 0.99
DDX55-205ENST00000538744 NLRC5Q86WI3 1866 aa21.23■□□□□ 0.99
DDX55-205ENST00000538744 PATJQ8NI35 1801 aa21.22■□□□□ 0.99
DDX55-205ENST00000538744 PTPRDP23468 1912 aa21.22■□□□□ 0.99
DDX55-205ENST00000538744 HHLA1C9JL84 531 aa21.22■□□□□ 0.99
DDX55-205ENST00000538744 NRP1O14786 923 aa21.22■□□□□ 0.99
DDX55-205ENST00000538744 ITGB1P05556 798 aa21.22■□□□□ 0.99
DDX55-205ENST00000538744 CDK7P50613 346 aa21.22■□□□□ 0.99
DDX55-205ENST00000538744 ATP1A2P50993 1020 aa21.22■□□□□ 0.99
DDX55-205ENST00000538744 TSPY1Q01534 308 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms