RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 LCP1P13796 627 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 TGM2P21980 687 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 LMO2P25791 158 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 SLC9A4Q6AI14 798 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 NPLOC4Q8TAT6 608 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 CCDC110Q8TBZ0 833 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 TEKT4Q8WW24 435 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 ZNF75CPQ92670 426 aaPredicted RBP25.9■■□□□ 1.74
RAB40C-204ENST00000538492 IKBKGQ9Y6K9 419 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 NQO1P15559 274 aaKnown RBP25.89■■□□□ 1.74
RAB40C-204ENST00000538492 PTK7Q13308 1070 aa25.89■■□□□ 1.74
RAB40C-204ENST00000538492 GRB14Q14449 540 aa25.89■■□□□ 1.74
RAB40C-204ENST00000538492 ZNF618Q5T7W0 954 aa25.89■■□□□ 1.74
RAB40C-204ENST00000538492 SSU72Q9NP77 194 aaKnown RBP25.89■■□□□ 1.74
RAB40C-204ENST00000538492 MORF4L1Q9UBU8 362 aa25.89■■□□□ 1.74
RAB40C-204ENST00000538492 CLEC11AQ9Y240 323 aa25.89■■□□□ 1.74
RAB40C-204ENST00000538492 RALGAPA2Q2PPJ7 1873 aa25.89■■□□□ 1.73
RAB40C-204ENST00000538492 APRTP07741 180 aa25.89■■□□□ 1.73
RAB40C-204ENST00000538492 SETSIPP0DME0 302 aa25.89■■□□□ 1.73
RAB40C-204ENST00000538492 SMIM10L2AP0DMW4 78 aa25.89■■□□□ 1.73
RAB40C-204ENST00000538492 SMIM10L2BP0DMW5 78 aa25.89■■□□□ 1.73
RAB40C-204ENST00000538492 LRRC52Q8N7C0 313 aa25.89■■□□□ 1.73
RAB40C-204ENST00000538492 BANPQ8N9N5 519 aa25.89■■□□□ 1.73
RAB40C-204ENST00000538492 TBCBQ99426 244 aa25.89■■□□□ 1.73
RAB40C-204ENST00000538492 DHX35Q9H5Z1 703 aaKnown RBP25.89■■□□□ 1.73
RAB40C-204ENST00000538492 ALG13Q9NP73 1137 aaKnown RBP25.89■■□□□ 1.73
RAB40C-204ENST00000538492 ATP6V1G2O95670 118 aa25.88■■□□□ 1.73
RAB40C-204ENST00000538492 CYP2F1P24903 491 aa25.88■■□□□ 1.73
RAB40C-204ENST00000538492 ZNF200P98182 395 aaPredicted RBP25.88■■□□□ 1.73
RAB40C-204ENST00000538492 APBB1IPQ7Z5R6 666 aaPredicted RBP25.88■■□□□ 1.73
RAB40C-204ENST00000538492 PRPF39Q86UA1 669 aaKnown RBP25.88■■□□□ 1.73
RAB40C-204ENST00000538492 LENG1Q96BZ8 264 aaPredicted RBP25.88■■□□□ 1.73
RAB40C-204ENST00000538492 MYLK2Q9H1R3 596 aa25.88■■□□□ 1.73
RAB40C-204ENST00000538492 RRN3P2A6NIE6 340 aa25.88■■□□□ 1.73
RAB40C-204ENST00000538492 MDM4O15151 490 aa25.88■■□□□ 1.73
RAB40C-204ENST00000538492 DESP17661 470 aa25.88■■□□□ 1.73
RAB40C-204ENST00000538492 GTF2A2P52657 109 aa25.88■■□□□ 1.73
RAB40C-204ENST00000538492 YWHAZP63104 245 aaKnown RBP25.88■■□□□ 1.73
RAB40C-204ENST00000538492 NRDE2Q9H7Z3 1164 aa25.88■■□□□ 1.73
RAB40C-204ENST00000538492 GOLGA2P5Q9HBQ8 144 aa25.88■■□□□ 1.73
RAB40C-204ENST00000538492 SPTLC1O15269 473 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 MT-ND3P03897 115 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 CYP2C9P11712 490 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 GBE1Q04446 702 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 FAAP100Q0VG06 881 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 FBXO47Q5MNV8 452 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 ALKAL1Q6UXT8 129 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 OTOAQ7RTW8 1153 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 KBTBD7Q8WVZ9 684 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 ERP27Q96DN0 273 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 SERAC1Q96JX3 654 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 ZNF670Q9BS34 389 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 SYT17Q9BSW7 474 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 ETNK2Q9NVF9 386 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 PIN4Q9Y237 131 aaKnown RBP25.87■■□□□ 1.73
RAB40C-204ENST00000538492 INHBAP08476 426 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 TSHRP16473 764 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 UNC93AQ86WB7 457 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 CEP57Q86XR8 500 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 TMEM40Q8WWA1 233 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 RTP4Q96DX8 246 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 ETNK1Q9HBU6 452 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 CNTN3Q9P232 1028 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 CHKBQ9Y259 395 aa25.87■■□□□ 1.73
RAB40C-204ENST00000538492 FAM155BO75949 473 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 DARSP14868 501 aaKnown RBP25.86■■□□□ 1.73
RAB40C-204ENST00000538492 HIC1Q14526 733 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 IQSEC1Q6DN90 963 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 DNAJB3Q8WWF6 145 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 SLC44A1Q8WWI5 657 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 KLC2Q9H0B6 622 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 RNF39Q9H2S5 420 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 NOD2Q9HC29 1040 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 USH1CQ9Y6N9 552 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 BCLAF3A2AJT9 711 aaKnown RBP25.86■■□□□ 1.73
RAB40C-204ENST00000538492 A6NJR5 290 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 L1CAMP32004 1257 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 GNL1P36915 607 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-204ENST00000538492 SNX16P57768 344 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 BST2Q10589 180 aaKnown RBP25.86■■□□□ 1.73
RAB40C-204ENST00000538492 SLC10A2Q12908 348 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-204ENST00000538492 ARHGAP17Q68EM7 881 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 CAND1Q86VP6 1230 aaKnown RBP25.86■■□□□ 1.73
RAB40C-204ENST00000538492 CTAGE3PQ8IX95 158 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 USP6NLQ92738 828 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 STK38LQ9Y2H1 464 aa25.86■■□□□ 1.73
RAB40C-204ENST00000538492 IQANK1A0A1B0GTG1 560 aa25.85■■□□□ 1.73
RAB40C-204ENST00000538492 KPNA7A9QM74 516 aa25.85■■□□□ 1.73
RAB40C-204ENST00000538492 LPXNO60711 386 aa25.85■■□□□ 1.73
RAB40C-204ENST00000538492 KRT16P08779 473 aa25.85■■□□□ 1.73
RAB40C-204ENST00000538492 SWT1Q5T5J6 900 aaKnown RBP25.85■■□□□ 1.73
RAB40C-204ENST00000538492 PLEKHH3Q7Z736 793 aa25.85■■□□□ 1.73
RAB40C-204ENST00000538492 ZDHHC17Q8IUH5 632 aa25.85■■□□□ 1.73
RAB40C-204ENST00000538492 ANKRD52Q8NB46 1076 aa25.85■■□□□ 1.73
RAB40C-204ENST00000538492 STK32AQ8WU08 396 aa25.85■■□□□ 1.73
RAB40C-204ENST00000538492 UBQLN1Q9UMX0 589 aaKnown RBP25.85■■□□□ 1.73
RAB40C-204ENST00000538492 SLC45A1Q9Y2W3 748 aa25.85■■□□□ 1.73
RAB40C-204ENST00000538492 SMIM28A0A1B0GU29 152 aa25.85■■□□□ 1.73
RAB40C-204ENST00000538492 CFAP69A5D8W1 941 aa25.85■■□□□ 1.73
RAB40C-204ENST00000538492 SETDB1Q15047 1291 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms