RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 VIPR1P32241 457 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 PPP1R2P41236 205 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 GPR85P60893 370 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 PRR5P85299 388 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 GTF2BQ00403 316 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 MESP2Q0VG99 397 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 KCNB1Q14721 858 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 NOLC1Q14978 699 aaKnown RBP eCLIP4.67□□□□□ -1.661e-323■■■■■ 29.1
SNHG1-208ENST00000538266 KNOP1Q1ED39 458 aaKnown RBP4.67□□□□□ -1.66
SNHG1-208ENST00000538266 DCAF4L1Q3SXM0 396 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 ZC2HC1CQ53FD0 456 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-208ENST00000538266 SLFN12LQ6IEE8 588 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 OGFOD2Q6N063 350 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 SLC27A1Q6PCB7 646 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 RPTNQ6XPR3 784 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 SYDE1Q6ZW31 735 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-208ENST00000538266 ZNF365Q70YC5 407 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 SLC24A5Q71RS6 500 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 ZNF720Q7Z2F6 126 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 MAMDC2Q7Z304 686 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-208ENST00000538266 MYOCDQ8IZQ8 938 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 TRIML1Q8N9V2 468 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 NETO2Q8NC67 525 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 RNF169Q8NCN4 708 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 MYRIPQ8NFW9 859 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 GOLGA5Q8TBA6 731 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 ERCC4Q92889 916 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-208ENST00000538266 HPS3Q969F9 1004 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 PEX11GQ96HA9 241 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 CPB2Q96IY4 423 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 FAM84AQ96KN4 292 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 TARS2Q9BW92 718 aaKnown RBP4.67□□□□□ -1.66
SNHG1-208ENST00000538266 JAM3Q9BX67 310 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 FZD8Q9H461 694 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 ST6GALNAC4Q9H4F1 302 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 TMEM206Q9H813 350 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 MINDY3Q9H8M7 445 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 SLC39A2Q9NP94 309 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 FBXL7Q9UJT9 491 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 NUDT5Q9UKK9 219 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 TNFSF13BQ9Y275 285 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 COA3Q9Y2R0 106 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-208ENST00000538266 PCDHB7Q9Y5E2 793 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 HCFC2Q9Y5Z7 792 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.67□□□□□ -1.66
SNHG1-208ENST00000538266 SLC4A7Q9Y6M7 1214 aa4.67□□□□□ -1.66
SNHG1-208ENST00000538266 CENPFP49454 3210 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 A0A0U1RQF3 1178 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 A0A1B0GUA9 196 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 TLDC2A0PJX2 215 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 GOLGA6L6A8MZA4 724 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 KLRC4O43908 158 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 TOM1L1O75674 476 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 PRPF6O94906 941 aaKnown RBP4.66□□□□□ -1.66
SNHG1-208ENST00000538266 NPTXRO95502 500 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 TMEM253P0C7T8 217 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 MYBP10242 640 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 MCF2P10911 925 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 MAPKAPK2P49137 400 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 SARSP49591 514 aaKnown RBP4.66□□□□□ -1.66
SNHG1-208ENST00000538266 CASP5P51878 434 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 EPHB4P54760 987 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 WDR5P61964 334 aaKnown RBP4.66□□□□□ -1.66
SNHG1-208ENST00000538266 GUCY1A3Q02108 690 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 STK4Q13043 487 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 GPNMBQ14956 572 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 KYAT1Q16773 422 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 TMEM240Q5SV17 173 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 ZNF648Q5T619 568 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-208ENST00000538266 NT5DC1Q5TFE4 455 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 MROH9Q5TGP6 573 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 ZNF658Q5TYW1 1059 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-208ENST00000538266 ISM2Q6H9L7 571 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 KLHL10Q6JEL2 608 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 ARMCX5Q6P1M9 558 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 ZC3H14Q6PJT7 736 aaKnown RBP4.66□□□□□ -1.66
SNHG1-208ENST00000538266 GLB1LQ6UWU2 654 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 MTDHQ86UE4 582 aaKnown RBP4.66□□□□□ -1.66
SNHG1-208ENST00000538266 NELFCDQ8IXH7 590 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 TDHQ8IZJ6 230 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 KIAA0895Q8NCT3 520 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 SPATA20Q8TB22 786 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.66□□□□□ -1.66
SNHG1-208ENST00000538266 NOC3LQ8WTT2 800 aaKnown RBP4.66□□□□□ -1.66
SNHG1-208ENST00000538266 POMGNT1Q8WZA1 660 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 HERVK_113Q902F9 699 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 PGBD4Q96DM1 585 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 RPS6KC1Q96S38 1066 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 YME1L1Q96TA2 773 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 SLC38A3Q99624 504 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 KCNJ15Q99712 375 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 ACO2Q99798 780 aaKnown RBP4.66□□□□□ -1.66
SNHG1-208ENST00000538266 TSG101Q99816 390 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 GDF15Q99988 308 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 MSTO1Q9BUK6 570 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 CCDC94Q9BW85 323 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-208ENST00000538266 SGPP1Q9BX95 441 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 CDIP1Q9H305 208 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 TMX1Q9H3N1 280 aa4.66□□□□□ -1.66
SNHG1-208ENST00000538266 PDZD7Q9H5P4 517 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms