RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 KLHL5Q96PQ7 755 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 CLSTN3Q9BQT9 956 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 BCO2Q9BYV7 579 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 TPSD1Q9BZJ3 242 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 MTG2Q9H4K7 406 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 DYRK4Q9NR20 520 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 THG1LQ9NWX6 298 aaKnown RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.55□□□□□ -1.24e-9■■■■□ 20.3
MSH6-209ENST00000538136 EHD2Q9NZN4 543 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 KLHL8Q9P2G9 620 aaPredicted RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 CDH9Q9ULB4 789 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 SLC8A2Q9UPR5 921 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 EYSQ5T1H1 3165 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 A0A1B0GUL6 1792 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 ZNF623O75123 536 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 PMPCBO75439 489 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 PALMO75781 387 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 HLA-EP13747 358 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 IL9P15248 144 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 SCNN1BP51168 640 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 ATXN3P54252 364 aaPredicted RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 YWHAGP61981 247 aaKnown RBP eCLIP7.55□□□□□ -1.2
MSH6-209ENST00000538136 GPC5P78333 572 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 NR1H3Q13133 447 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 ZNF177Q13360 481 aaPredicted RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 FNDC3BQ53EP0 1204 aaKnown RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 CEP68Q76N32 757 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 FUKQ8N0W3 1084 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 TDRD5Q8NAT2 981 aaKnown RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 MYCBPAPQ8TBZ2 947 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 RLN3Q8WXF3 142 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 CFHR5Q9BXR6 569 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 MRPL47Q9HD33 250 aaKnown RBP7.55□□□□□ -1.2
MSH6-209ENST00000538136 HEBP1Q9NRV9 189 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 PCDHA11Q9Y5I1 949 aa7.55□□□□□ -1.2
MSH6-209ENST00000538136 F5H5T6 163 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 TBL1XO60907 577 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 RDXP35241 583 aaKnown RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 FLT3P36888 993 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 KCNJ1P48048 391 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 TUBP50607 506 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 CACNA2D1P54289 1103 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 TMPRSS15P98073 1019 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 ADGRE1Q14246 886 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 IFI16Q16666 785 aaKnown RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 C10orf76Q5T2E6 689 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 E4F1Q66K89 784 aaPredicted RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 CDCA2Q69YH5 1023 aaPredicted RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 FOXR1Q6PIV2 292 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 CPNE8Q86YQ8 564 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 SLC35F6Q8N357 371 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 TXLNBQ8N3L3 684 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 CCDC112Q8NEF3 446 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 SPPL2BQ8TCT7 592 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 CYB5D2Q8WUJ1 264 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 TSC1Q92574 1164 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 ALKBH8Q96BT7 664 aaKnown RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 ASIC4Q96FT7 647 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 RPP25Q9BUL9 199 aaKnown RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 PLVAPQ9BX97 442 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 LIMA1Q9UHB6 759 aaKnown RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 LRRC37AA6NMS7 1700 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 DCNP07585 359 aaKnown RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 DNAJB1P25685 340 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 CORO1AP31146 461 aaKnown RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 DGKEP52429 567 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 MAXP61244 160 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 PDCLQ13371 301 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 TRIM71Q2Q1W2 868 aaKnown RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 SYPL2Q5VXT5 272 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 FAM183BPQ6ZVS7 135 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 PID1Q7Z2X4 250 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 FMNL3Q8IVF7 1028 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 UBL4BQ8N7F7 174 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 JOSD2Q8TAC2 188 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 SLC35G2Q8TBE7 412 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 FGF13Q92913 245 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 PIWIL1Q96J94 861 aaKnown RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 SUSD3Q96L08 255 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 MFSD14AQ96MC6 490 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 TTC25Q96NG3 672 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 SLC22A12Q96S37 553 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 MAGEB5Q9BZ81 275 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 ARHGEF4Q9NR80 690 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 DUS2Q9NX74 493 aaKnown RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 FAM50BQ9Y247 325 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 SSX2IPQ9Y2D8 614 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 PPME1Q9Y570 386 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 TRIOO75962 3097 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 NID2Q14112 1375 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 KRIT1O00522 736 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 DDX3XO00571 662 aaKnown RBP eCLIP7.54□□□□□ -1.2
MSH6-209ENST00000538136 ZRANB2O95218 330 aaKnown RBP eCLIP7.54□□□□□ -1.2
MSH6-209ENST00000538136 RAD23BP54727 409 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 ZNF235Q14590 738 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 GPRIN1Q7Z2K8 1008 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 MAP7D3Q8IWC1 876 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 DCLK2Q8N568 766 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms