RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 RIPOR3Q96MK2 946 aa13.5□□□□□ -0.25
PEX11B-203ENST00000537888 FAM129AQ9BZQ8 928 aa13.5□□□□□ -0.25
PEX11B-203ENST00000537888 PLEKHA4Q9H4M7 779 aa13.5□□□□□ -0.25
PEX11B-203ENST00000537888 FBXW11Q9UKB1 542 aa13.5□□□□□ -0.25
PEX11B-203ENST00000537888 UBQLN1Q9UMX0 589 aaKnown RBP13.5□□□□□ -0.25
PEX11B-203ENST00000537888 AGAP1Q9UPQ3 857 aa13.5□□□□□ -0.25
PEX11B-203ENST00000537888 C2orf16Q68DN1 1984 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 SYN3O14994 580 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 DAPK3O43293 454 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 DCXO43602 365 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 TRAPPC3O43617 180 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 OPA1O60313 960 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 TBC1D4O60343 1298 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 VDRP11473 427 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 COILP38432 576 aaPredicted RBP13.49□□□□□ -0.25
PEX11B-203ENST00000537888 MRPL58Q14197 206 aaKnown RBP13.49□□□□□ -0.25
PEX11B-203ENST00000537888 HLTFQ14527 1009 aaKnown RBP eCLIP13.49□□□□□ -0.25
PEX11B-203ENST00000537888 CNGA2Q16280 664 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 ZNF394Q53GI3 561 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 C2CD6Q53TS8 623 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 DENND1BQ6P3S1 775 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 DNAJC24Q6P3W2 148 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 ERICH1Q86X53 443 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 EXD1Q8NHP7 514 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 FNIP1Q8TF40 1166 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 ELOVL4Q9GZR5 314 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 SMYD3Q9H7B4 428 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 HOMER3Q9NSC5 361 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 WDR35Q9P2L0 1181 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 MUTYHQ9UIF7 546 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.49□□□□□ -0.25
PEX11B-203ENST00000537888 BACE2Q9Y5Z0 518 aa13.49□□□□□ -0.25
PEX11B-203ENST00000537888 GOLGA8KD6RF30 607 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 PPEF2O14830 753 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 SPATA31D3P0C874 917 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 RAP1GAPP47736 663 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 GUCY2FP51841 1108 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 CDH8P55286 799 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 RAB33AQ14088 237 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 PIGHQ14442 188 aaPredicted RBP13.48□□□□□ -0.25
PEX11B-203ENST00000537888 ATAT1Q5SQI0 421 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 VARS2Q5ST30 1063 aaKnown RBP13.48□□□□□ -0.25
PEX11B-203ENST00000537888 TTC27Q6P3X3 843 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 LRIG3Q6UXM1 1119 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 SPATA31D4Q6ZUB0 917 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 SYDE1Q6ZW31 735 aaPredicted RBP13.48□□□□□ -0.25
PEX11B-203ENST00000537888 ANKS3Q6ZW76 656 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 PHLDB2Q86SQ0 1253 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 LRRC52Q8N7C0 313 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 KREMEN2Q8NCW0 462 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 C1QTNF1Q9BXJ1 281 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 DPP7Q9UHL4 492 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 ADAM21Q9UKJ8 722 aa13.48□□□□□ -0.25
PEX11B-203ENST00000537888 TCRBV7S2A1N4TA0A589 114 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 SIGLEC16A6NMB1 481 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 C2CD4DB7Z1M9 353 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 RNF40O75150 1001 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 CD19P15391 556 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 GABRB2P47870 512 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 TAS2R40P59535 323 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 DMTNQ08495 405 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 MYO1EQ12965 1108 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 MTMR3Q13615 1198 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 ZNF268Q14587 947 aaPredicted RBP13.47□□□□□ -0.25
PEX11B-203ENST00000537888 STILQ15468 1287 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 PTPN20Q4JDL3 420 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 CFAP58Q5T655 872 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 SLC8B1Q6J4K2 584 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 CCDC137Q6PK04 289 aaKnown RBP13.47□□□□□ -0.25
PEX11B-203ENST00000537888 ADAT2Q7Z6V5 191 aaKnown RBP13.47□□□□□ -0.25
PEX11B-203ENST00000537888 DDX42Q86XP3 938 aaKnown RBP eCLIP13.47□□□□□ -0.25
PEX11B-203ENST00000537888 GOLGA6L1Q8N7Z2 621 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 C18orf8Q96DM3 657 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 TWNKQ96RR1 684 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 TRIM51Q9BSJ1 452 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 TXLNGYQ9BZA5 131 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 NEUROG2Q9H2A3 272 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 ZDHHC18Q9NUE0 388 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 ZDHHC7Q9NXF8 308 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 VPS18Q9P253 973 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.47□□□□□ -0.25
PEX11B-203ENST00000537888 USTQ9Y2C2 406 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 CDY1Q9Y6F8 540 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 MTCL1Q9Y4B5 1905 aaKnown RBP13.47□□□□□ -0.25
PEX11B-203ENST00000537888 TECTAO75443 2155 aa13.47□□□□□ -0.25
PEX11B-203ENST00000537888 CCDC195A0A1B0GUA6 201 aa13.46□□□□□ -0.25
PEX11B-203ENST00000537888 M0QZQ0 153 aa13.46□□□□□ -0.25
PEX11B-203ENST00000537888 O00370 1275 aa13.46□□□□□ -0.25
PEX11B-203ENST00000537888 ALADP13716 330 aa13.46□□□□□ -0.25
PEX11B-203ENST00000537888 SP100P23497 879 aaPredicted RBP13.46□□□□□ -0.25
PEX11B-203ENST00000537888 OR1D2P34982 312 aa13.46□□□□□ -0.25
PEX11B-203ENST00000537888 PTPN7P35236 360 aa13.46□□□□□ -0.25
PEX11B-203ENST00000537888 COPS2P61201 443 aa13.46□□□□□ -0.25
PEX11B-203ENST00000537888 RPL7AP62424 266 aaKnown RBP13.46□□□□□ -0.25
PEX11B-203ENST00000537888 ZNF252P-AS1Q0IIN9 211 aa13.46□□□□□ -0.25
PEX11B-203ENST00000537888 KLF1Q13351 362 aaPredicted RBP13.46□□□□□ -0.25
PEX11B-203ENST00000537888 RCOR2Q8IZ40 523 aa13.46□□□□□ -0.25
PEX11B-203ENST00000537888 BEST2Q8NFU1 509 aa13.46□□□□□ -0.25
PEX11B-203ENST00000537888 ZIM3Q96PE6 472 aa13.46□□□□□ -0.25
PEX11B-203ENST00000537888 FEZ2Q9UHY8 353 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms