RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 F5H6K3 240 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 USP2O75604 605 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 KRT6AP02538 564 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 KRT6BP04259 564 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 C6orf222P0C671 652 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 MZF1P28698 734 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 C11orf63Q6NUN7 778 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 NLRX1Q86UT6 975 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 C4orf32Q8N8J7 132 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 LILRB4Q8NHJ6 448 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 CAPSLQ8WWF8 208 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 NLRP7Q8WX94 980 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 ALG3Q92685 438 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 MAELQ96JY0 434 aaKnown RBP11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 PIGSQ96S52 555 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 MRGBPQ9NV56 204 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 ANGPTL3Q9Y5C1 460 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 CENPBD1B2RD01 187 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 MCF2P10911 925 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 PTPRAP18433 802 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 ADRA1DP25100 572 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 ITGADQ13349 1161 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 PLEKHG4Q58EX7 1191 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 OGFRL1Q5TC84 451 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 ARHGEF16Q5VV41 709 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 OGFOD2Q6N063 350 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 DCAF4Q8WV16 495 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 LARP4BQ92615 738 aaKnown RBP11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 CEP95Q96GE4 821 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 CAAP1Q9H8G2 361 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 SAYSD1Q9NPB0 183 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 MYRFQ9Y2G1 1151 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 TBKBP1A7MCY6 615 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 CHMP2AO43633 222 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 UGT1A9O60656 530 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 CD48P09326 243 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 ACTN1P12814 892 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 UGT1A6P19224 532 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 UGT1A1P22309 533 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 UGT1A4P22310 534 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 UGT1A3P35503 534 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 UGT1A5P35504 534 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 FXNQ16595 210 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 CALCRLQ16602 461 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 MOGQ16653 247 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 HP1BP3Q5SSJ5 553 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 RASAL3Q86YV0 1011 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 MINDY2Q8NBR6 621 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 RASGRP4Q8TDF6 673 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 AMNQ9BXJ7 453 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 MARCH7Q9H992 704 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 UGT1A7Q9HAW7 530 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 UGT1A10Q9HAW8 530 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 UGT1A8Q9HAW9 530 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 PRM3Q9NNZ6 103 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 AAASQ9NRG9 546 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 SLC24A2Q9UI40 661 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 PCDHA3Q9Y5H8 950 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 MYBPC1Q00872 1141 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 TUBA3CQ13748 450 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 PTK6Q13882 451 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 ZNF568Q3ZCX4 644 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 SBK1Q52WX2 424 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 FAM26FQ5R3K3 315 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 UBR3Q6ZT12 1888 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 ANKRD13BQ86YJ7 626 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 PQLC1Q8N2U9 271 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 ARRDC4Q8NCT1 418 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 SLC7A5P2Q9GIP4 190 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 HMX1Q9NP08 348 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 NYAP2Q9P242 653 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 MYH4Q9Y623 1939 aa11.26□□□□□ -0.61
CLSTN3-207ENST00000537408 ASB14A6NK59 587 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 ZNF839A8K0R7 811 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 CYP26A1O43174 497 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 AKR1B1P15121 316 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 PTK2BQ14289 1009 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 PPP1R2P3Q6NXS1 205 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 TTC7BQ86TV6 843 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 GRAMD2AQ8IUY3 354 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 C12orf50Q8NA57 414 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 TTC13Q8NBP0 860 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 FKBP14Q9NWM8 211 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 PLA2G4CQ9UP65 541 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 ZNF701M0R085 212 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 PSMD12O00232 456 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 DLATP10515 647 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 XRCC5P13010 732 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 TSPY1Q01534 308 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 C15orf59Q2T9L4 293 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 IFNL1Q8IU54 200 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 GLYCTKQ8IVS8 523 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 HELQQ8TDG4 1101 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 KCNK16Q96T55 309 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 HIPK3Q9H422 1215 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 MROH8Q9H579 483 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 LRRC19Q9H756 370 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 ACAD9Q9H845 621 aa11.25□□□□□ -0.61
CLSTN3-207ENST00000537408 HACD3Q9P035 362 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms