RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 LNX2Q8N448 690 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 LRRC71Q8N4P6 559 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 SOCS4Q8WXH5 440 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 CPT1BQ92523 772 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 VPS50Q96JG6 964 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 AIFM2Q9BRQ8 373 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 VPS16Q9H269 839 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 SLC2A4RGQ9NR83 387 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 KCTD5Q9NXV2 234 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 EHD3Q9NZN3 535 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 DKK2Q9UBU2 259 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 C19orf53Q9UNZ5 99 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-208ENST00000536710 ADGRA2Q96PE1 1338 aa6.17□□□□□ -1.42
PRKDC-208ENST00000536710 IL6RP08887 468 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-208ENST00000536710 CKMT1AP12532 417 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 JUPP14923 745 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 ZEB1P37275 1124 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-208ENST00000536710 MAGEA10P43363 369 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-208ENST00000536710 ACOX1Q15067 660 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 ST3GAL2Q16842 350 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 ZNF569Q5MCW4 686 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 LRRTM4Q86VH4 590 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 PROKR1Q8TCW9 393 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 FUBP1Q96AE4 644 aaKnown RBP6.16□□□□□ -1.42
PRKDC-208ENST00000536710 Q96MF0 132 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 COG8Q96MW5 612 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 TTPALQ9BTX7 342 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 ALG8Q9BVK2 526 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 CCDC134Q9H6E4 229 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 KLC4Q9NSK0 619 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 DKK3Q9UBP4 350 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 CNTN6Q9UQ52 1028 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 CRYL1Q9Y2S2 319 aa6.16□□□□□ -1.42
PRKDC-208ENST00000536710 FAM90A18PA6NE21 464 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 FAM90A16PA6NEW6 464 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 FAM90A9PA6NNJ1 464 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 FAM90A5PA8MXJ8 464 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 E7EVH7 732 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 KIAA0355O15063 1070 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 DHHO43323 396 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 PROM1O43490 865 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 FOXD2O60548 495 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-208ENST00000536710 NXPH3O95157 252 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 PRKCBP05771 671 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 FAM90A15PP0C7V4 464 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 FAM90A14PP0C7W9 464 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 CREB1P16220 341 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 ZNF20P17024 532 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 SERPINA4P29622 427 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 TPTEP56180 551 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 ACTR2P61160 394 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 SUMO2P61956 95 aaKnown RBP6.15□□□□□ -1.42
PRKDC-208ENST00000536710 DGCR2P98153 550 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 RNASELQ05823 741 aaKnown RBP6.15□□□□□ -1.42
PRKDC-208ENST00000536710 SF3A3Q12874 501 aaKnown RBP eCLIP6.15□□□□□ -1.42
PRKDC-208ENST00000536710 SLC12A1Q13621 1099 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 FAM110CQ1W6H9 321 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 MSANTD2Q6P1R3 559 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 TMED8Q6PL24 325 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-208ENST00000536710 TRABD2AQ86V40 505 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 LCORLQ8N3X6 602 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 CEP70Q8NHQ1 597 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 SLC22A17Q8WUG5 538 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 TFAP2BQ92481 460 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 MCRS1Q96EZ8 462 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 WDR11Q9BZH6 1224 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 CHODLQ9H9P2 273 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 TRIM36Q9NQ86 728 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 FBXO28Q9NVF7 368 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 NDUFAF4Q9P032 175 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 IFT80Q9P2H3 777 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-208ENST00000536710 PDP2Q9P2J9 529 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 PGAP2Q9UHJ9 254 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 NFU1Q9UMS0 254 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 TSC22D4Q9Y3Q8 395 aa6.15□□□□□ -1.42
PRKDC-208ENST00000536710 VWC2LB2RUY7 222 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 AP4M1O00189 453 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 CES2O00748 559 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 CBFA2T3O75081 653 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 ONECUT2O95948 504 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 NR2F6P10588 404 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 ZFXP17010 805 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-208ENST00000536710 GKP32189 559 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 RBM5P52756 815 aaKnown RBP eCLIP6.14□□□□□ -1.43
PRKDC-208ENST00000536710 DGKQP52824 942 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 LMOD3Q0VAK6 560 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 MTAPQ13126 283 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 TBX2Q13207 712 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-208ENST00000536710 SEMA3BQ13214 749 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 TUBA3CQ13748 450 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 BMPR2Q13873 1038 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 CDSNQ15517 529 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 LY6G5CQ5SRR4 150 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 ABHD17BQ5VST6 288 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 CCDC144NLQ6NUI1 221 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 TUBA3EQ6PEY2 450 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 PIK3AP1Q6ZUJ8 805 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 SYT13Q7L8C5 426 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 HERC6Q8IVU3 1022 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 SLC44A3Q8N4M1 653 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms