RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CELF5Q8N6W0 485 aaKnown RBP12.65□□□□□ -0.38
CHD4-203ENST00000535717 SLC30A5Q8TAD4 765 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 RIN3Q8TB24 985 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 E2F7Q96AV8 911 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 PIWIL1Q96J94 861 aaKnown RBP12.65□□□□□ -0.38
CHD4-203ENST00000535717 DNAJC7Q99615 494 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 SYNCQ9H7C4 482 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 SEPT11Q9NVA2 429 aaKnown RBP12.65□□□□□ -0.38
CHD4-203ENST00000535717 MUTYHQ9UIF7 546 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 NUDT5Q9UKK9 219 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 ARHGAP26Q9UNA1 814 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 DPYSL4O14531 572 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 MDM4O15151 490 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 SART1O43290 800 aaKnown RBP12.64□□□□□ -0.39
CHD4-203ENST00000535717 LTFP02788 710 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 SERPING1P05155 500 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 FYNP06241 537 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 PLEKP08567 350 aaPredicted RBP12.64□□□□□ -0.39
CHD4-203ENST00000535717 TPM1P09493 284 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 MBL2P11226 248 aaPredicted RBP12.64□□□□□ -0.39
CHD4-203ENST00000535717 RALAP11233 206 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 TNFAIP3P21580 790 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 MMP8P22894 467 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 HNRNPH3P31942 346 aaKnown RBP12.64□□□□□ -0.39
CHD4-203ENST00000535717 ATP5C1P36542 298 aaKnown RBP12.64□□□□□ -0.39
CHD4-203ENST00000535717 GABRB2P47870 512 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 ADKP55263 362 aaKnown RBP12.64□□□□□ -0.39
CHD4-203ENST00000535717 SNX16P57768 344 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 CENPCQ03188 943 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 GRM2Q14416 872 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 ARID5BQ14865 1188 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 TAF5Q15542 800 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 C2CD6Q53TS8 623 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 C10orf120Q5SQS8 335 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 BTBD8Q5XKL5 378 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 KLHDC10Q6PID8 442 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 OLFML1Q6UWY5 402 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 FAM183BPQ6ZVS7 135 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 MFSD6LQ8IWD5 586 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 OR8K1Q8NGG5 319 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 SH3RF2Q8TEC5 729 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 IPO4Q8TEX9 1081 aaKnown RBP12.64□□□□□ -0.39
CHD4-203ENST00000535717 EDEM1Q92611 657 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 KHSRPQ92945 711 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHD4-203ENST00000535717 C18orf8Q96DM3 657 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 ZFRQ96KR1 1074 aaKnown RBP12.64□□□□□ -0.39
CHD4-203ENST00000535717 COL25A1Q9BXS0 654 aaPredicted RBP12.64□□□□□ -0.39
CHD4-203ENST00000535717 NACA2Q9H009 215 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 SMOC2Q9H3U7 446 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 GKN1Q9NS71 199 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 ABCC13Q9NSE7 274 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 SMPD4Q9NXE4 827 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 OBP2AQ9NY56 170 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 SORCS3Q9UPU3 1222 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 CPQQ9Y646 472 aa12.64□□□□□ -0.39
CHD4-203ENST00000535717 HELZP42694 1942 aaKnown RBP12.63□□□□□ -0.39
CHD4-203ENST00000535717 LEFTY2O00292 366 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 DDX3XO00571 662 aaKnown RBP eCLIP12.63□□□□□ -0.39
CHD4-203ENST00000535717 NARSO43776 548 aaKnown RBP12.63□□□□□ -0.39
CHD4-203ENST00000535717 MFAP3LO75121 409 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 ADCY5O95622 1261 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 PSMC3P17980 439 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 FCHO2Q0JRZ9 810 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 EFEMP1Q12805 493 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 PTP4A2Q12974 167 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 USP4Q13107 963 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 ZNF77Q15935 545 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 TDRD12Q587J7 1177 aaKnown RBP12.63□□□□□ -0.39
CHD4-203ENST00000535717 OR6B2Q6IFH4 312 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 WDR59Q6PJI9 974 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 MMS22LQ6ZRQ5 1243 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 RSRC2Q7L4I2 434 aaKnown RBP12.63□□□□□ -0.39
CHD4-203ENST00000535717 TADA2BQ86TJ2 420 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 XYLT1Q86Y38 959 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 MSANTD4Q8NCY6 345 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 TTC16Q8NEE8 873 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 GOLGA1Q92805 767 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 FAM149B1Q96BN6 582 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 CDK5RAP1Q96SZ6 601 aaKnown RBP12.63□□□□□ -0.39
CHD4-203ENST00000535717 KLF16Q9BXK1 252 aaPredicted RBP12.63□□□□□ -0.39
CHD4-203ENST00000535717 KIF9Q9HAQ2 790 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 ABHD10Q9NUJ1 306 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 TAS2R14Q9NYV8 317 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 ARHGAP20Q9P2F6 1191 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 DNMT3LQ9UJW3 386 aa12.63□□□□□ -0.39
CHD4-203ENST00000535717 BZW2Q9Y6E2 419 aaKnown RBP12.63□□□□□ -0.39
CHD4-203ENST00000535717 AKR1B15C9JRZ8 316 aaPredicted RBP12.62□□□□□ -0.39
CHD4-203ENST00000535717 TCF3P15923 654 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 NSFP46459 744 aaKnown RBP12.62□□□□□ -0.39
CHD4-203ENST00000535717 YWHAZP63104 245 aaKnown RBP12.62□□□□□ -0.39
CHD4-203ENST00000535717 GPC5P78333 572 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 SLC6A3Q01959 620 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 EFHC1Q5JVL4 640 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 ACAD10Q6JQN1 1059 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 MSANTD2Q6P1R3 559 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 TOGARAM2Q6ZUX3 1019 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 BEND5Q7L4P6 421 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 SLC26A9Q7LBE3 791 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 PHF13Q86YI8 300 aaPredicted RBP12.62□□□□□ -0.39
CHD4-203ENST00000535717 MIB1Q86YT6 1006 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms