RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CHAMP1Q96JM3 812 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 SMOQ99835 787 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 NUSAP1Q9BXS6 441 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 TPSD1Q9BZJ3 242 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 UBXN6Q9BZV1 441 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 CYP3A43Q9HB55 503 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 DNAAF2Q9NVR5 837 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 CLIC5Q9NZA1 410 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 RCOR1Q9UKL0 485 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 SLC6A14Q9UN76 642 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 TRAF3IP3Q9Y228 551 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 PCDHA5Q9Y5H7 936 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 USP3Q9Y6I4 520 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 FAM237AA0A1B0GTK4 181 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 LRRIQ3A6PVS8 624 aaPredicted RBP11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 PATE3B3GLJ2 98 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 CLDN5O00501 218 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 GIPC1O14908 333 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 CLIC2O15247 247 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 TLR5O60602 858 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 EXOC3O60645 756 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 IGLV3-19P01714 112 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 CISD3P0C7P0 127 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 GABRG2P18507 467 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 ZNF252P-AS1Q0IIN9 211 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 DUOXA1Q1HG43 343 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 ZNF699Q32M78 642 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 TRIM61Q5EBN2 209 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 C1orf220Q5T0J3 134 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 EMC10Q5UCC4 262 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 LYSMD4Q5XG99 296 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 BTBD8Q5XKL5 378 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 TMEM25Q86YD3 366 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 BBS7Q8IWZ6 715 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 CCDC33Q8N5R6 958 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 ZNF513Q8N8E2 541 aaPredicted RBP11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 RDH13Q8NBN7 331 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 ADAM33Q9BZ11 813 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 SDCBP2Q9H190 292 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 CCSER2Q9H7U1 834 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 TLR8Q9NR97 1041 aaKnown RBP11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 SMPD4Q9NXE4 827 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 CHORDC1Q9UHD1 332 aaPredicted RBP11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 USP25Q9UHP3 1055 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 MSRB2Q9Y3D2 182 aa11.86□□□□□ -0.51
CLSTN3-206ENST00000535668 TBC1D3BA6NDS4 549 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 POLR2DO15514 142 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 PENKP01210 267 aaPredicted RBP11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 ENGP17813 658 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 ACO1P21399 889 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 ATP5C1P36542 298 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 ASPAP45381 313 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 CYP2J2P51589 502 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 CDH8P55286 799 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 SEC13P55735 322 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 PDE4CQ08493 712 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 STK4Q13043 487 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 E2F5Q15329 346 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 SV2AQ7L0J3 742 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 CCDC186Q7Z3E2 898 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 KIAA0895Q8NCT3 520 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 DNASE2BQ8WZ79 361 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 PIGKQ92643 395 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 DHX58Q96C10 678 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 CDK5RAP1Q96SZ6 601 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 SLC32A1Q9H598 525 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 SMYD3Q9H7B4 428 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 NXF1Q9UBU9 619 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 PCDHA7Q9UN72 937 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 ZNF510Q9Y2H8 683 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 SH3BP1Q9Y3L3 701 aa11.85□□□□□ -0.51
CLSTN3-206ENST00000535668 IGHV1OR15-9A0A0B4J2B8 117 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 ACTN4O43707 911 aaKnown RBP11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 AP1G2O75843 785 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 BEST1O76090 585 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 TIE1P35590 1138 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 PLA2G4AP47712 749 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 DHPSP49366 369 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 PGFP49763 221 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 KIF11P52732 1056 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 CUL4BQ13620 913 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 DBX2Q6ZNG2 339 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 CLEC20AQ6ZU45 233 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 GLRX5Q86SX6 157 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 MIB1Q86YT6 1006 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 FAM217AQ8IXS0 508 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 TTC39CQ8N584 583 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 RBBP8NLQ8NC74 664 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 CADM4Q8NFZ8 388 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 SLC2A14Q8TDB8 520 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 FOXJ1Q92949 421 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 XPO6Q96QU8 1125 aaKnown RBP11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 IRX2Q9BZI1 471 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 ZDHHC5Q9C0B5 715 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 PCED1AQ9H1Q7 454 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 SLC39A2Q9NP94 309 aa11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLSTN3-206ENST00000535668 KRT82Q9NSB4 513 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms