RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 SLC38A8A6NNN8 435 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 TCF4P15884 667 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 ERVK-21P61565 698 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 ZNF211Q13398 564 aaPredicted RBP23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 RAB30Q15771 203 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 BTBD8Q5XKL5 378 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 RASGEF1CQ8N431 466 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 ACTRT1Q8TDG2 376 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 GIPC2Q8TF65 315 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 FBXO32Q969P5 355 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 NT5C3BQ969T7 300 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 MS4A14Q96JA4 679 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 KLHL5Q96PQ7 755 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 TBCBQ99426 244 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 NAP1L3Q99457 506 aaPredicted RBP23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 NPY6RQ99463 290 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 PCSK1NQ9UHG2 260 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 MSRAQ9UJ68 235 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 YBX2Q9Y2T7 364 aaKnown RBP23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 YIPF1Q9Y548 306 aa23.94■■□□□ 1.42
RBFOX1-206ENST00000535565 FAM92AA1XBS5 289 aa23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 PGRMC1O00264 195 aaKnown RBP23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 ZRANB2O95218 330 aaKnown RBP eCLIP23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 FYNP06241 537 aa23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 CETN2P41208 172 aa23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 USP46P62068 366 aa23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 VEPH1Q14D04 833 aa23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 SYPL2Q5VXT5 272 aa23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 SCYL2Q6P3W7 929 aa23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 MRPL43Q8N983 215 aaKnown RBP23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 EXD1Q8NHP7 514 aa23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 MICAL1Q8TDZ2 1067 aa23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 EDEM1Q92611 657 aa23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 RBM41Q96IZ5 413 aaKnown RBP23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 ZWILCHQ9H900 591 aa23.93■■□□□ 1.42
RBFOX1-206ENST00000535565 CTAGE15A4D2H0 777 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 C2orf71A6NGG8 1288 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 M0QYT0 321 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 TRUB2O95900 331 aaKnown RBP23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 KRT1P04264 644 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 CTAGE8P0CG41 777 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 CSH1P0DML2 217 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 CSH2P0DML3 217 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 PYGMP11217 842 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 DNAJB1P25685 340 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 KLRC2P26717 231 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 PSEN1P49768 467 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 HDAC4P56524 1084 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 PLD1Q13393 1074 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 SPRED2Q7Z698 418 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 CTAGE6Q86UF2 777 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 CCDC50Q8IVM0 306 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 CTAGE4Q8IX94 777 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 SLC7A14Q8TBB6 771 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 RPGRIP1Q96KN7 1286 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 SLITRK1Q96PX8 696 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 PBX4Q9BYU1 374 aa23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 TTC7AQ9ULT0 858 aaPredicted RBP23.92■■□□□ 1.42
RBFOX1-206ENST00000535565 TGM5O43548 720 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 CSPG5O95196 566 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 TFE3P19532 575 aaPredicted RBP23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 IL1R2P27930 398 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 RDXP35241 583 aaKnown RBP23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 PBX2P40425 430 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 TAF12Q16514 161 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 PDE12Q6L8Q7 609 aaKnown RBP23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 RCOR2Q8IZ40 523 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 TTLL2Q9BWV7 592 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 TLR8Q9NR97 1041 aaKnown RBP23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 MAGED2Q9UNF1 606 aaPredicted RBP23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 INSL5Q9Y5Q6 135 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 MTCL1Q9Y4B5 1905 aaKnown RBP23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 A0A1W2PQH9 124 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 GRM6O15303 877 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 ENDOD1O94919 500 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 F9P00740 461 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 DEUP1Q05D60 604 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 TAF10Q12962 218 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 GPM6BQ13491 265 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 MTMR3Q13615 1198 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 SMTNL2Q2TAL5 461 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 BOLA3Q53S33 107 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 CCDC149Q6ZUS6 474 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 ZNF572Q7Z3I7 529 aaPredicted RBP23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 SCD5Q86SK9 330 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 RNF139Q8WU17 664 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 FAM204AQ9H8W3 233 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 GMIPQ9P107 970 aa23.91■■□□□ 1.42
RBFOX1-206ENST00000535565 HIDE1A8MVS5 230 aa23.9■■□□□ 1.42
RBFOX1-206ENST00000535565 H3BNC9 293 aa23.9■■□□□ 1.42
RBFOX1-206ENST00000535565 PDE2AO00408 941 aaPredicted RBP23.9■■□□□ 1.42
RBFOX1-206ENST00000535565 FSCN2O14926 492 aa23.9■■□□□ 1.42
RBFOX1-206ENST00000535565 FGGP02679 453 aa23.9■■□□□ 1.42
RBFOX1-206ENST00000535565 BMP8BP34820 402 aa23.9■■□□□ 1.42
RBFOX1-206ENST00000535565 EPHB3P54753 998 aa23.9■■□□□ 1.42
RBFOX1-206ENST00000535565 NME3Q13232 169 aa23.9■■□□□ 1.42
RBFOX1-206ENST00000535565 RAB6CQ53S08 254 aa23.9■■□□□ 1.42
RBFOX1-206ENST00000535565 TXNRD3NBQ6F5E7 133 aa23.9■■□□□ 1.42
RBFOX1-206ENST00000535565 SND1Q7KZF4 910 aaKnown RBP eCLIP23.9■■□□□ 1.42
RBFOX1-206ENST00000535565 BNIPLQ7Z465 357 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms