RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 CEP250Q9BV73 2442 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 CACNA1AO00555 2505 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 C4orf47A7E2U8 309 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 TNFRSF10BO14763 440 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 TULP3O75386 442 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 NTSR1P30989 418 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 GTF2H1P32780 548 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 GCLMP48507 274 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 DGKGP49619 791 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 MXI1P50539 228 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 DLG4P78352 724 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 COG7P83436 770 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 RPL6Q02878 288 aaKnown RBP13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 ORC1Q13415 861 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 STIM1Q13586 685 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 TRIM61Q5EBN2 209 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 TCERG1LQ5VWI1 586 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 TPGS1Q6ZTW0 290 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 ARMCX6Q7L4S7 300 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 GUF1Q8N442 669 aaKnown RBP13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 TERB1Q8NA31 727 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 IL17RCQ8NAC3 791 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 LSM14BQ9BX40 385 aaKnown RBP13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 KCTD10Q9H3F6 313 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 FAM124BQ9H5Z6 455 aaPredicted RBP13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 TMEM8AQ9HCN3 771 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 POLR3BQ9NW08 1133 aaPredicted RBP13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 HESX1Q9UBX0 185 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 MAPK8IP1Q9UQF2 711 aa13.96□□□□□ -0.17
CLSTN3-205ENST00000535452 SGK1O00141 431 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 KLRC4O43908 158 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 RHOBTB3O94955 611 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 KCNK5O95279 499 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 SMC2O95347 1197 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 CFIP05156 583 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 RARGP13631 454 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 TYRP14679 529 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 GNSP15586 552 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 HOXD12P35452 270 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 ZXDBP98169 803 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 GFPT1Q06210 699 aaPredicted RBP13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 CETN1Q12798 172 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 NFIL3Q16649 462 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 SYCP2LQ5T4T6 812 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 PSAPL1Q6NUJ1 521 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 KLHDC10Q6PID8 442 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 HTR3DQ70Z44 454 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 SYT12Q8IV01 421 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 C12orf29Q8N999 325 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 FAXDC2Q96IV6 333 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 SMOQ99835 787 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 SMOC1Q9H4F8 434 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 CSNK1G1Q9HCP0 422 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 CYLDQ9NQC7 956 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 IL37Q9NZH6 218 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 RASAL2Q9UJF2 1139 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 NME7Q9Y5B8 376 aa13.95□□□□□ -0.18
CLSTN3-205ENST00000535452 HELZP42694 1942 aaKnown RBP13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 A0A0A0MRY4 1105 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 A0A1W2PQ27 194 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 A0A1W2PQ64 194 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 A0A1W2PQD8 194 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 FAM92AA1XBS5 289 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 NPC1O15118 1278 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 SYNCRIPO60506 623 aaKnown RBP13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 VNN1O95497 513 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 ZDHHC11BP0C7U3 371 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 TRIM49P0CI25 452 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 TRIM49CP0CI26 452 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 P2RY2P41231 377 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 ASPAP45381 313 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 NDUFA8P51970 172 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 INCA1Q0VD86 236 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 BECN1Q14457 450 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 EDRF1Q3B7T1 1238 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 ZNF394Q53GI3 561 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 DCAF17Q5H9S7 520 aaPredicted RBP13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 TCEAL6Q6IPX3 200 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 SPOPLQ6IQ16 392 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 KRBA2Q6ZNG9 492 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 CLEC20AQ6ZU45 233 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 MIB1Q86YT6 1006 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 TMEFF1Q8IYR6 380 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 RGL4Q8IZJ4 473 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 FBXL13Q8NEE6 735 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 RNF139Q8WU17 664 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 EZH1Q92800 747 aaPredicted RBP13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 GOLGA1Q92805 767 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 TCEAL3Q969E4 200 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 IPO9Q96P70 1041 aaKnown RBP13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 SDCBP2Q9H190 292 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 LRRC4Q9HBW1 653 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 SUSD2Q9UGT4 822 aa13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 EVLQ9UI08 416 aaPredicted RBP13.94□□□□□ -0.18
CLSTN3-205ENST00000535452 LNP1A1A4G5 178 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 CYP26A1O43174 497 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 SYPP08247 313 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 HOXC13P31276 330 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 MAPK8P45983 427 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms