RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 OLFM1Q99784 485 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 PXMP2Q9NR77 195 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 UBQLN1Q9UMX0 589 aaKnown RBP13.02□□□□□ -0.33
SPG11-203ENST00000535302 CKMP06732 381 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 SUPT20HL2P0C7V6 817 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 DOK6Q6PKX4 331 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 LRIG3Q6UXM1 1119 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 CLIP3Q96DZ5 547 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 TMEM169Q96HH4 297 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 C16orf96A6NNT2 1141 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 TPH1P17752 444 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 GIT2Q14161 759 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 HIST2H2ACQ16777 129 aaPredicted RBP13.02□□□□□ -0.33
SPG11-203ENST00000535302 HIST2H2AA3Q6FI13 130 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 UNC45BQ8IWX7 931 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 IZUMO1Q8IYV9 350 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 PDLIM2Q96JY6 352 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 ZNF512BQ96KM6 892 aaPredicted RBP13.02□□□□□ -0.33
SPG11-203ENST00000535302 RHBGQ9H310 441 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 ANKEF1Q9NU02 776 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 HAO1Q9UJM8 370 aa13.02□□□□□ -0.33
SPG11-203ENST00000535302 VWA5AO00534 786 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 SCAMP3O14828 347 aaKnown RBP13.01□□□□□ -0.33
SPG11-203ENST00000535302 ACADMP11310 421 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 RBBP4Q09028 425 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 MPZL3Q6UWV2 235 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 MACC1Q6ZN28 852 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 PTAR1Q7Z6K3 402 aaPredicted RBP13.01□□□□□ -0.33
SPG11-203ENST00000535302 TFAP2DQ7Z6R9 452 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 SLC11A2P49281 568 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 SARSP49591 514 aaKnown RBP13.01□□□□□ -0.33
SPG11-203ENST00000535302 COX10Q12887 443 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 CCNIQ14094 377 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 ADAM32Q8TC27 787 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 DNAJB3Q8WWF6 145 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 NARS2Q96I59 477 aaKnown RBP13.01□□□□□ -0.33
SPG11-203ENST00000535302 NT5MQ9NPB1 228 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 MEI4A8MW99 385 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 DDNO94850 711 aaPredicted RBP13.01□□□□□ -0.33
SPG11-203ENST00000535302 NAPEPLDQ6IQ20 393 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 FOXR1Q6PIV2 292 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 CYP2W1Q8TAV3 490 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 UTP15Q8TED0 518 aaKnown RBP13.01□□□□□ -0.33
SPG11-203ENST00000535302 MAP3K14Q99558 947 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 COLEC11Q9BWP8 271 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 GID8Q9NWU2 228 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 NEXMIFQ5QGS0 1516 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 A0A1W2PQJ5 194 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 ERI2A8K979 691 aaKnown RBP13.01□□□□□ -0.33
SPG11-203ENST00000535302 TRIM13O60858 407 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 CALCAP01258 141 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 LSP1P33241 339 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 GCLCP48506 637 aaPredicted RBP13.01□□□□□ -0.33
SPG11-203ENST00000535302 CNTN1Q12860 1018 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 TRPM8Q7Z2W7 1104 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 SLC13A5Q86YT5 568 aaPredicted RBP13.01□□□□□ -0.33
SPG11-203ENST00000535302 TMC2Q8TDI7 906 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 ZSWIM1Q9BR11 485 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 GRID1Q9ULK0 1009 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 PQBP1O60828 265 aaKnown RBP13.01□□□□□ -0.33
SPG11-203ENST00000535302 CYP11B1P15538 503 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 EPHX2P34913 555 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 TOB1P50616 345 aaPredicted RBP13.01□□□□□ -0.33
SPG11-203ENST00000535302 BMPR2Q13873 1038 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 PTK6Q13882 451 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 TATDN2Q93075 761 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 SIKE1Q9BRV8 207 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 SNX13Q9Y5W8 968 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 GPR182O15218 404 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 NUP62P37198 522 aaPredicted RBP13.01□□□□□ -0.33
SPG11-203ENST00000535302 RCN1Q15293 331 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 KRT35Q92764 455 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 VPS28Q9UK41 221 aa13.01□□□□□ -0.33
SPG11-203ENST00000535302 NOS3P29474 1203 aa13□□□□□ -0.33
SPG11-203ENST00000535302 BACE1P56817 501 aa13□□□□□ -0.33
SPG11-203ENST00000535302 CENPCQ03188 943 aa13□□□□□ -0.33
SPG11-203ENST00000535302 KCTD19Q17RG1 926 aaPredicted RBP13□□□□□ -0.33
SPG11-203ENST00000535302 TLK2Q86UE8 772 aa13□□□□□ -0.33
SPG11-203ENST00000535302 LRRC34Q8IZ02 419 aa13□□□□□ -0.33
SPG11-203ENST00000535302 POMGNT2Q8NAT1 580 aa13□□□□□ -0.33
SPG11-203ENST00000535302 CATSPER1Q8NEC5 780 aa13□□□□□ -0.33
SPG11-203ENST00000535302 TAS1R2Q8TE23 839 aa13□□□□□ -0.33
SPG11-203ENST00000535302 TADA1Q96BN2 335 aa13□□□□□ -0.33
SPG11-203ENST00000535302 ACOX2Q99424 681 aa13□□□□□ -0.33
SPG11-203ENST00000535302 CHURC1-FNTBB4DL54 471 aa13□□□□□ -0.33
SPG11-203ENST00000535302 SLFN11Q7Z7L1 901 aa13□□□□□ -0.33
SPG11-203ENST00000535302 EPHX4Q8IUS5 362 aa13□□□□□ -0.33
SPG11-203ENST00000535302 NMD3Q96D46 503 aaKnown RBP13□□□□□ -0.33
SPG11-203ENST00000535302 PHF21BQ96EK2 531 aa13□□□□□ -0.33
SPG11-203ENST00000535302 SEPHS2Q99611 448 aa13□□□□□ -0.33
SPG11-203ENST00000535302 ISCUQ9H1K1 167 aa13□□□□□ -0.33
SPG11-203ENST00000535302 MAP1SQ66K74 1059 aaPredicted RBP13□□□□□ -0.33
SPG11-203ENST00000535302 RNF44Q7L0R7 432 aa13□□□□□ -0.33
SPG11-203ENST00000535302 CCDC3Q9BQI4 270 aa13□□□□□ -0.33
SPG11-203ENST00000535302 SENP6Q9GZR1 1112 aaPredicted RBP13□□□□□ -0.33
SPG11-203ENST00000535302 IL1RAPL1Q9NZN1 696 aa13□□□□□ -0.33
SPG11-203ENST00000535302 CAPN6Q9Y6Q1 641 aa13□□□□□ -0.33
SPG11-203ENST00000535302 GJB6O95452 261 aa13□□□□□ -0.33
SPG11-203ENST00000535302 KLC1Q07866 573 aa13□□□□□ -0.33
SPG11-203ENST00000535302 TROAPQ12815 778 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms