RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 RAD51CO43502 376 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 ZMYND10O75800 440 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 NCAM1P13591 858 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 KDELR1P24390 212 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 GLUD2P49448 558 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 DSG1Q02413 1049 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 MGAT5BQ3V5L5 792 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 TFDP3Q5H9I0 405 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 STRADAQ7RTN6 431 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 FIBCD1Q8N539 461 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SEPT5Q99719 369 aaPredicted RBP21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 GPATCH2LQ9NWQ4 482 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 MTUS1Q9ULD2 1270 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 INSL6Q9Y581 213 aa21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 COL4A4P53420 1690 aaPredicted RBP21.22■□□□□ 0.99
TNFRSF1A-205ENST00000534885 hCG_1818297A0A087WSY0 165 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 PGFP49763 221 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SMARCB1Q12824 385 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 ZC3H12AQ5D1E8 599 aaKnown RBP21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 BSPRYQ5W0U4 402 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CCDC70Q6NSX1 233 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 BNIPLQ7Z465 357 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 DDX53Q86TM3 631 aaKnown RBP21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 KCTD6Q8NC69 237 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 ADAM32Q8TC27 787 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 HERVK_113Q902F9 699 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 HTATIP2Q9BUP3 242 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SNRNP25Q9BV90 132 aaKnown RBP21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 HERC2P3Q9BVR0 1158 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 STAP1Q9ULZ2 295 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SLC4A7Q9Y6M7 1214 aa21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 ZNF638Q14966 1978 aaKnown RBP21.21■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SYNJ2BP-COX16A0A087WUM0 186 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 M0QYT0 321 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 PHF2O75151 1096 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CETN2P41208 172 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 COPS2P61201 443 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 USP46P62068 366 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 VSNL1P62760 191 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 FBXO38Q6PIJ6 1188 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 FAM131BQ86XD5 332 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 HERC6Q8IVU3 1022 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 VPS52Q8N1B4 723 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 NUP93Q8N1F7 819 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 C1orf54Q8WWF1 131 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 AUTS2Q8WXX7 1259 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 NCAPGQ9BPX3 1015 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 COX16Q9P0S2 106 aa21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 R3HDM2Q9Y2K5 976 aaKnown RBP21.2■□□□□ 0.99
TNFRSF1A-205ENST00000534885 GREB1Q4ZG55 1949 aa21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 RANBP2P49792 3224 aaKnown RBP21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 TARSL2A2RTX5 802 aaKnown RBP21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 HAPLN1P10915 354 aaPredicted RBP21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 DNAJB2P25686 324 aa21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 PPM1AP35813 382 aa21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 NME3Q13232 169 aa21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 CA9Q16790 459 aa21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 GLE1Q53GS7 698 aaKnown RBP21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 TTC27Q6P3X3 843 aa21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 CCDC185Q8N715 623 aa21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 SLC7A14Q8TBB6 771 aa21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 ATG4AQ8WYN0 398 aa21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 MAGOHBQ96A72 148 aaKnown RBP21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 PCDHB12Q9Y5F1 795 aa21.2■□□□□ 0.98
TNFRSF1A-205ENST00000534885 LCHNA4D1U4 455 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 ZSCAN5CA6NGD5 496 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 FGF18O76093 207 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 ENDOD1O94919 500 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 H2AFXP16104 143 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 ATP2A2P16615 1042 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 PTPN7P35236 360 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 CDH6P55285 790 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 PPP2R5EQ16537 467 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 CYP1B1Q16678 543 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 BOLA3Q53S33 107 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 TEKT4Q8WW24 435 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 FAM118BQ9BPY3 351 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 CALN1Q9BXU9 219 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 MAGEB5Q9BZ81 275 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 SLITRK6Q9H5Y7 841 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 AAASQ9NRG9 546 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 PIGVQ9NUD9 493 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 PLXNA3P51805 1871 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 CARNS1A5YM72 827 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 URODP06132 367 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 ARSEP51690 589 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 YWHAGP61981 247 aaKnown RBP eCLIP21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 MMRN1Q13201 1228 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 TAZQ16635 292 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 SCD5Q86SK9 330 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 C2orf15Q8WU43 125 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 CLP1Q92989 425 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 SLC9A7Q96T83 725 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 STIM2Q9P246 746 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 RAB21Q9UL25 225 aa21.19■□□□□ 0.98
TNFRSF1A-205ENST00000534885 MDM4O15151 490 aa21.18■□□□□ 0.98
TNFRSF1A-205ENST00000534885 TTI1O43156 1089 aa21.18■□□□□ 0.98
TNFRSF1A-205ENST00000534885 HEXIM1O94992 359 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1A-205ENST00000534885 RDXP35241 583 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1A-205ENST00000534885 DEUP1Q05D60 604 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms