RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 OR56A3Q8NH54 315 aa4.22□□□□□ -1.73
USP48-215ENST00000534705 BPIFB1Q8TDL5 484 aa4.22□□□□□ -1.73
USP48-215ENST00000534705 HASPINQ8TF76 798 aa4.22□□□□□ -1.73
USP48-215ENST00000534705 OSCP1Q8WVF1 389 aa4.22□□□□□ -1.73
USP48-215ENST00000534705 RSPRY1Q96DX4 576 aa4.22□□□□□ -1.73
USP48-215ENST00000534705 ZC3H10Q96K80 434 aaKnown RBP4.22□□□□□ -1.73
USP48-215ENST00000534705 PPP1R9BQ96SB3 815 aa4.22□□□□□ -1.73
USP48-215ENST00000534705 OGDHLQ9ULD0 1010 aa4.22□□□□□ -1.73
USP48-215ENST00000534705 ZNF804BA4D1E1 1349 aa4.21□□□□□ -1.73
USP48-215ENST00000534705 CNTNAP2Q9UHC6 1331 aa4.21□□□□□ -1.73
USP48-215ENST00000534705 HFM1A2PYH4 1435 aa4.21□□□□□ -1.73
USP48-215ENST00000534705 TRPM2O94759 1503 aa4.21□□□□□ -1.73
USP48-215ENST00000534705 LOC102723971A0A1B0GUV8 181 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 A1L4Q6 167 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 H0YIZ8 118 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 PYCARD-AS1I3L0S3 204 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 INMTO95050 263 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 PARNO95453 639 aaKnown RBP4.21□□□□□ -1.74
USP48-215ENST00000534705 PRKCBP05771 671 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 PDHA1P08559 390 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 DLDP09622 509 aaKnown RBP4.21□□□□□ -1.74
USP48-215ENST00000534705 EBLN1P0CF75 366 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 JUPP14923 745 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 NDUFB7P17568 137 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 LIPAP38571 399 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 CLCN2P51788 898 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 TPTEP56180 551 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 PROK1P58294 105 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 FMO1Q01740 532 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 TREML2Q5T2D2 321 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 PPP4R4Q6NUP7 873 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 CEP85Q6P2H3 762 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 NOL8Q76FK4 1167 aaKnown RBP4.21□□□□□ -1.74
USP48-215ENST00000534705 ZNF280BQ86YH2 543 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 ABRAQ8N0Z2 381 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 MPP5Q8N3R9 675 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 GLG1Q92896 1179 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 FSD1LQ9BXM9 530 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 NUP62CLQ9H1M0 184 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 ZNF287Q9HBT7 754 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 CPNE5Q9HCH3 593 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 DLL3Q9NYJ7 618 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 COL20A1Q9P218 1284 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 CHPF2Q9P2E5 772 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 CPNE7Q9UBL6 633 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 CDY1Q9Y6F8 540 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 NWD1Q149M9 1564 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 XRN1Q8IZH2 1706 aaKnown RBP4.21□□□□□ -1.74
USP48-215ENST00000534705 ZFYVE9O95405 1425 aa4.21□□□□□ -1.74
USP48-215ENST00000534705 RGPD8O14715 1765 aaPredicted RBP4.2□□□□□ -1.74
USP48-215ENST00000534705 IQSEC2Q5JU85 1478 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 WIPF3A6NGB9 483 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 TMEM233B4DJY2 109 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 hCG_1984214I3L0E3 225 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 M0R3H8 397 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 PRKCGP05129 697 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 TXNP10599 105 aaKnown RBP4.2□□□□□ -1.74
USP48-215ENST00000534705 BCAT1P54687 386 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 FCRLBQ6BAA4 426 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 SUMO4Q6EEV6 95 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 C11orf87Q6NUJ2 197 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 SESTD1Q86VW0 696 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 STRBPQ96SI9 672 aaKnown RBP4.2□□□□□ -1.74
USP48-215ENST00000534705 TRIM5Q9C035 493 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 UNKQ9C0B0 810 aaKnown RBP4.2□□□□□ -1.74
USP48-215ENST00000534705 FAM83DQ9H4H8 585 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 TRIM36Q9NQ86 728 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 IL17RBQ9NRM6 502 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 DUSP22Q9NRW4 184 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 SACM1LQ9NTJ5 587 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 GEMIN8Q9NWZ8 242 aaKnown RBP4.2□□□□□ -1.74
USP48-215ENST00000534705 DNMT3BQ9UBC3 853 aaKnown RBP4.2□□□□□ -1.74
USP48-215ENST00000534705 ADAM21Q9UKJ8 722 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 MRPS17Q9Y2R5 130 aaKnown RBP4.2□□□□□ -1.74
USP48-215ENST00000534705 NEXMIFQ5QGS0 1516 aa4.2□□□□□ -1.74
USP48-215ENST00000534705 SCAF11Q99590 1463 aaKnown RBP4.19□□□□□ -1.74
USP48-215ENST00000534705 KANK1Q14678 1352 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 KNDC1Q76NI1 1749 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 QSOX1O00391 747 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 JTBO76095 146 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 FESP07332 822 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 NPSP0C0P6 89 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 IL1R1P14778 569 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 ACVR2AP27037 513 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 PRKAG1P54619 331 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 EEFSECP57772 596 aaKnown RBP4.19□□□□□ -1.74
USP48-215ENST00000534705 RPS16P62249 146 aaKnown RBP4.19□□□□□ -1.74
USP48-215ENST00000534705 TIAL1Q01085 375 aaKnown RBP eCLIP4.19□□□□□ -1.74
USP48-215ENST00000534705 SP2Q02086 613 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 CCNIQ14094 377 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 Q6ZWC4 215 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 PARS2Q7L3T8 475 aaKnown RBP4.19□□□□□ -1.74
USP48-215ENST00000534705 SLC29A4Q7RTT9 530 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 RASAL3Q86YV0 1011 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 YAF2Q8IY57 180 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 IZUMO1Q8IYV9 350 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 SPARTQ8N0X7 666 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 SMCR8Q8TEV9 937 aaPredicted RBP4.19□□□□□ -1.74
USP48-215ENST00000534705 UBE2Q2Q8WVN8 375 aa4.19□□□□□ -1.74
USP48-215ENST00000534705 IPCEF1Q8WWN9 437 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms