RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	FGFR2	P21802	821 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	PRKAR1B	P31321	381 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	TM4SF4	P48230	202 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	BCAT1	P54687	386 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	UBE4A	Q14139	1066 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	SLC29A2	Q14542	456 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	ARHGAP15	Q53QZ3	475 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	PRAMEF17	Q5VTA0	474 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	ZNF626	Q68DY1	528 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	PLAG1	Q6DJT9	500 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	RNF44	Q7L0R7	432 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	IZUMO1	Q8IYV9	350 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	TXLNB	Q8N3L3	684 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	METTL25	Q8N6Q8	603 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	SIRT6	Q8N6T7	355 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	ATP11C	Q8NB49	1132 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	NGDN	Q8NEJ9	315 aa	Known RBP	4.07	□□□□□ -1.76
RDX-215	ENST00000533961	SVIP	Q8NHG7	77 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.07	□□□□□ -1.76
RDX-215	ENST00000533961	IQCD	Q96DY2	449 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	SGCZ	Q96LD1	299 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	ASB2	Q96Q27	587 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	FYTTD1	Q96QD9	318 aa	Known RBP	4.07	□□□□□ -1.76
RDX-215	ENST00000533961	TMEM79	Q9BSE2	394 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	DPCD	Q9BVM2	203 aa	Predicted RBP	4.07	□□□□□ -1.76
RDX-215	ENST00000533961	FAM83D	Q9H4H8	585 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	SH3BP4	Q9P0V3	963 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	MAN2B2	Q9Y2E5	1009 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	FAM234B	A2RU67	622 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	CYSRT1	A8MQ03	144 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	PRRT4	C9JH25	899 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	ADAMTS3	O15072	1205 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	MOSPD3	O75425	235 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	PRR35	P0CG20	571 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	TPH1	P17752	444 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	IL1R2	P27930	398 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	EPHA3	P29320	983 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	CPT1A	P50416	773 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	AK2	P54819	239 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	RAPGEF1	Q13905	1077 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	ARHGEF7	Q14155	803 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	RAP1GAP2	Q684P5	730 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.06	□□□□□ -1.76
RDX-215	ENST00000533961	CATSPERG	Q6ZRH7	1159 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	SPART	Q8N0X7	666 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	GALNT16	Q8N428	558 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	PIGO	Q8TEQ8	1089 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	IPO4	Q8TEX9	1081 aa	Known RBP	4.06	□□□□□ -1.76
RDX-215	ENST00000533961	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.06	□□□□□ -1.76
RDX-215	ENST00000533961	MYD88	Q99836	296 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	ELAC2	Q9BQ52	826 aa	Known RBP	4.06	□□□□□ -1.76
RDX-215	ENST00000533961	TRIM5	Q9C035	493 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	UNK	Q9C0B0	810 aa	Known RBP	4.06	□□□□□ -1.76
RDX-215	ENST00000533961	GAR1	Q9NY12	217 aa	Known RBP	4.06	□□□□□ -1.76
RDX-215	ENST00000533961	WWOX	Q9NZC7	414 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	CCNL1	Q9UK58	526 aa	Predicted RBP	4.06	□□□□□ -1.76
RDX-215	ENST00000533961	MAFF	Q9ULX9	164 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	BTBD3	Q9Y2F9	522 aa		4.06	□□□□□ -1.76
RDX-215	ENST00000533961	CYP2D7	A0A087X1C5	515 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961		A0A1W2PPC4	97 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	PRR23D1	E9PI22	279 aa	Predicted RBP	4.05	□□□□□ -1.76
RDX-215	ENST00000533961	AP4M1	O00189	453 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	INSIG1	O15503	277 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	PLIN1	O60240	522 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	A1BG	P04217	495 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	ANXA2	P07355	339 aa	Known RBP	4.05	□□□□□ -1.76
RDX-215	ENST00000533961	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.05	□□□□□ -1.76
RDX-215	ENST00000533961	PEPD	P12955	493 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	CD19	P15391	556 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	FPR3	P25089	353 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	EPHB2	P29323	1055 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	ATIC	P31939	592 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	IL6ST	P40189	918 aa	Predicted RBP	4.05	□□□□□ -1.76
RDX-215	ENST00000533961	POLG	P54098	1239 aa	Predicted RBP	4.05	□□□□□ -1.76
RDX-215	ENST00000533961	FHL3	Q13643	280 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	LAMB3	Q13751	1172 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	ETFDH	Q16134	617 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	ARL13B	Q3SXY8	428 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	C10orf62	Q5T681	223 aa	Predicted RBP	4.05	□□□□□ -1.76
RDX-215	ENST00000533961	MZT2A	Q6P582	158 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	NAPRT	Q6XQN6	538 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.05	□□□□□ -1.76
RDX-215	ENST00000533961	CAND1	Q86VP6	1230 aa	Known RBP	4.05	□□□□□ -1.76
RDX-215	ENST00000533961	YAF2	Q8IY57	180 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	FAM186B	Q8IYM0	893 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	TERB1	Q8NA31	727 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	ADAMTS18	Q8TE60	1221 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	MSLNL	Q96KJ4	702 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	SNX15	Q9NRS6	342 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	AMFR	Q9UKV5	643 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	HPSE	Q9Y251	543 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	LRP12	Q9Y561	859 aa		4.05	□□□□□ -1.76
RDX-215	ENST00000533961	AQP7P3	A6NL99	342 aa		4.04	□□□□□ -1.76
RDX-215	ENST00000533961	AQP12B	A6NM10	295 aa		4.04	□□□□□ -1.76
RDX-215	ENST00000533961	TISP43	B9A030	160 aa		4.04	□□□□□ -1.76
RDX-215	ENST00000533961	FOXN3	O00409	490 aa	Predicted RBP	4.04	□□□□□ -1.76
RDX-215	ENST00000533961	SNHG28	P0DPA3	235 aa		4.04	□□□□□ -1.76
RDX-215	ENST00000533961	PECAM1	P16284	738 aa	Predicted RBP	4.04	□□□□□ -1.76
RDX-215	ENST00000533961	UQCRC1	P31930	480 aa		4.04	□□□□□ -1.76
RDX-215	ENST00000533961	GK	P32189	559 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms