RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, human

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP3-215	ENST00000533946	CYTH4	Q9UIA0	394 aa		10.15	□□□□□ -0.78
SSBP3-215	ENST00000533946	NAGPA	Q9UK23	515 aa		10.15	□□□□□ -0.78
SSBP3-215	ENST00000533946	TSPAN16	Q9UKR8	245 aa		10.15	□□□□□ -0.78
SSBP3-215	ENST00000533946	PCDHGA2	Q9Y5H1	932 aa		10.15	□□□□□ -0.78
SSBP3-215	ENST00000533946	FRY	Q5TBA9	3013 aa		10.15	□□□□□ -0.78
SSBP3-215	ENST00000533946	YJEFN3	A6XGL0	299 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	WASH3P	C4AMC7	463 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	PRRT4	C9JH25	899 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946		E7ENQ6	273 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946		O00370	1275 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	PSMA7	O14818	248 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	TULP3	O75386	442 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	STC2	O76061	302 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	CD19	P15391	556 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	BCKDHB	P21953	392 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	TIE1	P35590	1138 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	MAGEA9	P43362	315 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	SGSH	P51688	502 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	TKTL1	P51854	596 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	ENPEP	Q07075	957 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	EFEMP1	Q12805	493 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	DMC1	Q14565	340 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	DPCR1	Q3MIW9	517 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	RAB41	Q5JT25	222 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	C10orf120	Q5SQS8	335 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	ARHGAP17	Q68EM7	881 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	PMF1	Q6P1K2	205 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	DENND1B	Q6P3S1	775 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	TMEM270	Q6UE05	265 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946		Q6ZNB5	142 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	EHBP1	Q8NDI1	1231 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	RLN3	Q8WXF3	142 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	CEP295NL	Q96MC4	621 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	HINFP	Q9BQA5	517 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	IMPG2	Q9BZV3	1241 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	INTS2	Q9H0H0	1204 aa	Known RBP	10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	CYLD	Q9NQC7	956 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	LMBRD1	Q9NUN5	540 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	SFMBT1	Q9UHJ3	866 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	PCDHB4	Q9Y5E5	795 aa		10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	10.14	□□□□□ -0.79
SSBP3-215	ENST00000533946	ATP8B3	O60423	1300 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	E2F8	A0AVK6	867 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	BECN2	A8MW95	431 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	AXIN1	O15169	862 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	MSI1	O43347	362 aa	Known RBP	10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	KAT7	O95251	611 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	PAPSS2	O95340	614 aa	Predicted RBP	10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	KLF8	O95600	359 aa	Predicted RBP	10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	FYN	P06241	537 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	ADH5	P11766	374 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	LCP1	P13796	627 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	DRD1	P21728	446 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	KIR2DL1	P43626	348 aa	Predicted RBP	10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	ZNF132	P52740	706 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	UBE2H	P62256	183 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	PITX1	P78337	314 aa	Predicted RBP	10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	ADIG	Q0VDE8	80 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	PAK1	Q13153	545 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	SIM2	Q14190	667 aa	Predicted RBP	10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	ANO4	Q32M45	955 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	TCEAL6	Q6IPX3	200 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	HTR3D	Q70Z44	454 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	CCDC186	Q7Z3E2	898 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	CREBRF	Q8IUR6	639 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	PPM1K	Q8N3J5	372 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	IL17RC	Q8NAC3	791 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	ANKRD52	Q8NB46	1076 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	TXNDC5	Q8NBS9	432 aa	Known RBP	10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	GPT2	Q8TD30	523 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	OVCA2	Q8WZ82	227 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	RUBCN	Q92622	972 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	SECISBP2L	Q93073	1101 aa	Known RBP	10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	TCEAL3	Q969E4	200 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	MSANTD3	Q96H12	275 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	PIWIL1	Q96J94	861 aa	Known RBP	10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	CEP63	Q96MT8	703 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	SIX2	Q9NPC8	291 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	TLR8	Q9NR97	1041 aa	Known RBP	10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	SPHK2	Q9NRA0	654 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	ZMYM5	Q9UJ78	669 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	RASAL2	Q9UJF2	1139 aa		10.13	□□□□□ -0.79
SSBP3-215	ENST00000533946	THADA	Q6YHU6	1953 aa		10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	GOLGA6L7	A0A1B0GV03	622 aa		10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	NFATC1	O95644	943 aa		10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	CISD3	P0C7P0	127 aa		10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	ATP5C1	P36542	298 aa	Known RBP	10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	PPP3CC	P48454	512 aa		10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	NUMB	P49757	651 aa		10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	SF3A2	Q15428	464 aa	Known RBP	10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	TAF5	Q15542	800 aa		10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	EGFLAM	Q63HQ2	1017 aa		10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	KIAA1211L	Q6NV74	962 aa		10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	WDR5B	Q86VZ2	330 aa		10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	LONP2	Q86WA8	852 aa		10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	PDZD8	Q8NEN9	1154 aa		10.12	□□□□□ -0.79
SSBP3-215	ENST00000533946	SLC35F5	Q8WV83	523 aa		10.12	□□□□□ -0.79

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