RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 ZBTB45Q96K62 511 aaPredicted RBP8.26□□□□□ -1.09
CASP4-212ENST00000533730 GSDMAQ96QA5 445 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 FAM83CQ9BQN1 747 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 MENTQ9BUN1 341 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 PRDM14Q9GZV8 571 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 NRDE2Q9H7Z3 1164 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 CERS4Q9HA82 394 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 SLC38A7Q9NVC3 462 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 RANBP2P49792 3224 aaKnown RBP8.26□□□□□ -1.09
CASP4-212ENST00000533730 FSD2A1L4K1 749 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 K7ESF4 209 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 XPOTO43592 962 aaKnown RBP8.25□□□□□ -1.09
CASP4-212ENST00000533730 FGF18O76093 207 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 PRPF6O94906 941 aaKnown RBP8.25□□□□□ -1.09
CASP4-212ENST00000533730 ITGB1P05556 798 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 GALTP07902 379 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 HARSP12081 509 aaKnown RBP8.25□□□□□ -1.09
CASP4-212ENST00000533730 KCNE1P15382 129 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 CASP1P29466 404 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 ASPAP45381 313 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 CASP5P51878 434 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 TUSC3Q13454 348 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 BMT2Q1RMZ1 405 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 DPY19L1Q2PZI1 675 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 ATP13A4Q4VNC1 1196 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 TIGD5Q53EQ6 642 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 XKR4Q5GH76 650 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 ARMCX5Q6P1M9 558 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 SLC39A4Q6P5W5 647 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 BEND4Q6ZU67 534 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.25□□□□□ -1.09
CASP4-212ENST00000533730 SLC39A11Q8N1S5 342 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 KREMEN2Q8NCW0 462 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 GDPD5Q8WTR4 605 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 SMARCE1Q969G3 411 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 PPP2R3CQ969Q6 453 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 TMEM169Q96HH4 297 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 FUBP3Q96I24 572 aaKnown RBP eCLIP8.25□□□□□ -1.09
CASP4-212ENST00000533730 SNX27Q96L92 541 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 UROC1Q96N76 676 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 MIPEPQ99797 713 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 COLEC11Q9BWP8 271 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 C7orf69Q9H7B7 122 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 RPF1Q9H9Y2 349 aaKnown RBP8.25□□□□□ -1.09
CASP4-212ENST00000533730 KIAA1586Q9HCI6 787 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 SLC39A2Q9NP94 309 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 GFOD1Q9NXC2 390 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 STOML1Q9UBI4 398 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 AGO2Q9UKV8 859 aaKnown RBP8.25□□□□□ -1.09
CASP4-212ENST00000533730 PLAGL2Q9UPG8 496 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 NLRC5Q86WI3 1866 aa8.25□□□□□ -1.09
CASP4-212ENST00000533730 SMIM28A0A1B0GU29 152 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 TTC26A0AVF1 554 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 HMX2A2RU54 273 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 EPOPA6NHQ4 379 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 ANKRD63C9JTQ0 380 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 IFRD1O00458 451 aaPredicted RBP8.24□□□□□ -1.09
CASP4-212ENST00000533730 PTGESO14684 152 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 FAM189A1O60320 539 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 LPXNO60711 386 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 DDHD2O94830 711 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 SNUPNO95149 360 aaKnown RBP8.24□□□□□ -1.09
CASP4-212ENST00000533730 IL18RAPO95256 599 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 ADRB2P07550 413 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 CCND1P24385 295 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 RPL9P32969 192 aaKnown RBP8.24□□□□□ -1.09
CASP4-212ENST00000533730 PPP1R2P41236 205 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 SLC11A1P49279 550 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 OSTNP61366 133 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 AMPD2Q01433 879 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 ELAVL2Q12926 359 aaKnown RBP8.24□□□□□ -1.09
CASP4-212ENST00000533730 KNOP1Q1ED39 458 aaKnown RBP8.24□□□□□ -1.09
CASP4-212ENST00000533730 INAVAQ3KP66 663 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 C10orf62Q5T681 223 aaPredicted RBP8.24□□□□□ -1.09
CASP4-212ENST00000533730 LETMD1Q6P1Q0 360 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 ALKAL1Q6UXT8 129 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 SPRED2Q7Z698 418 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 C11orf96Q7Z7L8 435 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 CDH24Q86UP0 819 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 ZNF280BQ86YH2 543 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 C12orf56Q8IXR9 622 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 COLGALT2Q8IYK4 626 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 SMYD4Q8IYR2 804 aaPredicted RBP8.24□□□□□ -1.09
CASP4-212ENST00000533730 SPATA20Q8TB22 786 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 SPPL3Q8TCT6 385 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 SCFD1Q8WVM8 642 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 IGSF21Q96ID5 467 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 PPP1R10Q96QC0 940 aaKnown RBP8.24□□□□□ -1.09
CASP4-212ENST00000533730 ASPNQ9BXN1 380 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 FGFBP2Q9BYJ0 223 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 SEMA6CQ9H3T2 930 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 ASB7Q9H672 318 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 EMC7Q9NPA0 242 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 NGRNQ9NPE2 291 aaKnown RBP8.24□□□□□ -1.09
CASP4-212ENST00000533730 TLR9Q9NR96 1032 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 THG1LQ9NWX6 298 aaKnown RBP8.24□□□□□ -1.09
CASP4-212ENST00000533730 DNAJB4Q9UDY4 337 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 CPSF3Q9UKF6 684 aaKnown RBP8.24□□□□□ -1.09
CASP4-212ENST00000533730 DERAQ9Y315 318 aa8.24□□□□□ -1.09
CASP4-212ENST00000533730 MTCH2Q9Y6C9 303 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms