RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CXCL14O95715 111 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 IGSF6O95976 241 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 PFKMP08237 780 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 EFL1Q7Z2Z2 1120 aaKnown RBP11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 TTC30BQ8N4P2 665 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 ETNPPLQ8TBG4 499 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 TRIM15Q9C019 465 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 TLE6Q9H808 572 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 PDGFCQ9NRA1 345 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 RAD18Q9NS91 495 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 BLOC1S4Q9NUP1 217 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 DRG1Q9Y295 367 aaKnown RBP11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 FIS1Q9Y3D6 152 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 TLL2Q9Y6L7 1015 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 F8VZ95 297 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 SGPL1O95470 568 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 MAPK8P45983 427 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 CLEC16AQ2KHT3 1053 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 SUSD6Q92537 303 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 CCT8L2Q96SF2 557 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 TTPALQ9BTX7 342 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 TBC1D13Q9NVG8 400 aa11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 ZC3H7BQ9UGR2 993 aaKnown RBP11.65□□□□□ -0.54
AMBRA1-211ENST00000533727 A0A0A6YYK5 440 aaPredicted RBP11.65□□□□□ -0.55
AMBRA1-211ENST00000533727 RAP1GAPP47736 663 aa11.65□□□□□ -0.55
AMBRA1-211ENST00000533727 FPGSQ05932 587 aa11.65□□□□□ -0.55
AMBRA1-211ENST00000533727 TRMT10CQ7L0Y3 403 aaKnown RBP11.65□□□□□ -0.55
AMBRA1-211ENST00000533727 LENG9Q96B70 501 aa11.65□□□□□ -0.55
AMBRA1-211ENST00000533727 GRAMD1AQ96CP6 724 aa11.65□□□□□ -0.55
AMBRA1-211ENST00000533727 HSD17B14Q9BPX1 270 aa11.65□□□□□ -0.55
AMBRA1-211ENST00000533727 GTSE1Q9NYZ3 720 aa11.65□□□□□ -0.55
AMBRA1-211ENST00000533727 WARS2Q9UGM6 360 aaKnown RBP11.65□□□□□ -0.55
AMBRA1-211ENST00000533727 HEATR9A2RTY3 570 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 CYP2A6P11509 494 aaPredicted RBP11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 GFAPP14136 432 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 SGCGQ13326 291 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 PCSK7Q16549 785 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 TMEM161BQ8NDZ6 487 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 ZNF473Q8WTR7 871 aaKnown RBP11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 WDR24Q96S15 920 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 C11orf84Q9BUA3 381 aaPredicted RBP11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 KCNF1Q9H3M0 494 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 POPDC2Q9HBU9 364 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 DNAJC17Q9NVM6 304 aaKnown RBP11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 LTFP02788 710 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 POLR2EP19388 210 aaKnown RBP11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 HNRNPH1P31943 449 aaKnown RBP11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 MDH1P40925 334 aaKnown RBP11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 FNTAP49354 379 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 FXR1P51114 621 aaKnown RBP eCLIP11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 POLR2LP62875 67 aaKnown RBP11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 KIF19Q2TAC6 998 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 ZRANB3Q5FWF4 1079 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 FOXR2Q6PJQ5 311 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 RXFP2Q8WXD0 754 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 HAS1Q92839 578 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 PALMDQ9NP74 551 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 RBPJLQ9UBG7 517 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 ZNF112Q9UJU3 913 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 DNMT3LQ9UJW3 386 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 PHRF1Q9P1Y6 1649 aaKnown RBP11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 NCK2O43639 380 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 PROSCO94903 275 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 EOMESO95936 686 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 NEK2P51955 445 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 NCKAP1LP55160 1127 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 PRKCQQ04759 706 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 ADIGQ0VDE8 80 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 NPAS4Q8IUM7 802 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 SLC2A14Q8TDB8 520 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 CEP19Q96LK0 163 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 RIPOR3Q96MK2 946 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 MORF4L1Q9UBU8 362 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 CASZ1Q86V15 1759 aa11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 RGPD8O14715 1765 aaPredicted RBP11.64□□□□□ -0.55
AMBRA1-211ENST00000533727 ESYT3A0FGR9 886 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 ERBB2P04626 1255 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 ACAT1P24752 427 aaKnown RBP11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 ACLYP53396 1101 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 LBRQ14739 615 aaKnown RBP11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 HIST2H2ACQ16777 129 aaPredicted RBP11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 ATAT1Q5SQI0 421 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 HIST2H2AA3Q6FI13 130 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 PALB2Q86YC2 1186 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 CCNYL1Q8N7R7 359 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 ZNF606Q8WXB4 792 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 PIK3R5Q8WYR1 880 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 AKAP7Q9P0M2 348 aaPredicted RBP11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 XPO7Q9UIA9 1087 aaKnown RBP11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 ZMYM5Q9UJ78 669 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 LRP6O75581 1613 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 ASTN2O75129 1339 aaPredicted RBP11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 BRAFP15056 766 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 EPC2Q52LR7 807 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 TEX9Q8N6V9 391 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 PGLYRP2Q96PD5 576 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 POP1Q99575 1024 aaKnown RBP11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 C2orf49Q9BVC5 232 aaPredicted RBP11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 MARCH2Q9P0N8 246 aa11.63□□□□□ -0.55
AMBRA1-211ENST00000533727 PRPF4O43172 522 aaKnown RBP eCLIP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms