RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 PCDHB18PQ96TA0 734 aa15.29■□□□□ 0.04
SF3B2-214ENST00000533595 PLA2G2FQ9BZM2 168 aa15.29■□□□□ 0.04
SF3B2-214ENST00000533595 HAUS4Q9H6D7 363 aa15.29■□□□□ 0.04
SF3B2-214ENST00000533595 ABCC13Q9NSE7 274 aa15.29■□□□□ 0.04
SF3B2-214ENST00000533595 SEPT11Q9NVA2 429 aaKnown RBP15.29■□□□□ 0.04
SF3B2-214ENST00000533595 TJP2Q9UDY2 1190 aa15.29■□□□□ 0.04
SF3B2-214ENST00000533595 MUTYHQ9UIF7 546 aa15.29■□□□□ 0.04
SF3B2-214ENST00000533595 TBX18O95935 607 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 LTFP02788 710 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 ERBB2P04626 1255 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 PSMC3P17980 439 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 TNFAIP3P21580 790 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 GRM2Q14416 872 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 CLEC16AQ2KHT3 1053 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 HFE2Q6ZVN8 426 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 RSRC2Q7L4I2 434 aaKnown RBP15.28■□□□□ 0.04
SF3B2-214ENST00000533595 YAF2Q8IY57 180 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 BPIFB1Q8TDL5 484 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 RNF139Q8WU17 664 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 FAM149B1Q96BN6 582 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 LRRC3BQ96PB8 259 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 SYT11Q9BT88 431 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 TRMT61BQ9BVS5 477 aaKnown RBP15.28■□□□□ 0.04
SF3B2-214ENST00000533595 SMPD4Q9NXE4 827 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 DNMT3LQ9UJW3 386 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 NUDT5Q9UKK9 219 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 CPQQ9Y646 472 aa15.28■□□□□ 0.04
SF3B2-214ENST00000533595 BZW2Q9Y6E2 419 aaKnown RBP15.28■□□□□ 0.04
SF3B2-214ENST00000533595 FAM170AA1A519 330 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 SERPING1P05155 500 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 SKILP12757 684 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 UNGP13051 313 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-214ENST00000533595 TCF3P15923 654 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 GABRB2P47870 512 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 TDRD12Q587J7 1177 aaKnown RBP15.27■□□□□ 0.04
SF3B2-214ENST00000533595 OR6B2Q6IFH4 312 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 ZNF571Q7Z3V5 609 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-214ENST00000533595 DDX42Q86XP3 938 aaKnown RBP eCLIP15.27■□□□□ 0.04
SF3B2-214ENST00000533595 ZDHHC17Q8IUH5 632 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 UBALD2Q8IYN6 164 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 TTC16Q8NEE8 873 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 OR8K1Q8NGG5 319 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 SLC30A5Q8TAD4 765 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 SH3RF2Q8TEC5 729 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 EDEM1Q92611 657 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 C18orf8Q96DM3 657 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 TRIM62Q9BVG3 475 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 OLA1Q9NTK5 396 aaKnown RBP15.27■□□□□ 0.04
SF3B2-214ENST00000533595 THG1LQ9NWX6 298 aaKnown RBP15.27■□□□□ 0.04
SF3B2-214ENST00000533595 DUSP12Q9UNI6 340 aa15.27■□□□□ 0.04
SF3B2-214ENST00000533595 HELZP42694 1942 aaKnown RBP15.26■□□□□ 0.03
SF3B2-214ENST00000533595 LEFTY2O00292 366 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 MDM4O15151 490 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 DCXO43602 365 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 NARSO43776 548 aaKnown RBP15.26■□□□□ 0.03
SF3B2-214ENST00000533595 SRFP11831 508 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 MMP8P22894 467 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 GDI1P31150 447 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 HNRNPH3P31942 346 aaKnown RBP15.26■□□□□ 0.03
SF3B2-214ENST00000533595 NSFP46459 744 aaKnown RBP15.26■□□□□ 0.03
SF3B2-214ENST00000533595 YWHAZP63104 245 aaKnown RBP15.26■□□□□ 0.03
SF3B2-214ENST00000533595 ZXDBP98169 803 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 CENPCQ03188 943 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 FCHO2Q0JRZ9 810 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 EFEMP1Q12805 493 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 USP4Q13107 963 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 TBX2Q13207 712 aaPredicted RBP15.26■□□□□ 0.03
SF3B2-214ENST00000533595 ZNF77Q15935 545 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 TSR1Q2NL82 804 aaKnown RBP15.26■□□□□ 0.03
SF3B2-214ENST00000533595 EFHC1Q5JVL4 640 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 HGSNATQ68CP4 663 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 CC2D1AQ6P1N0 951 aaPredicted RBP15.26■□□□□ 0.03
SF3B2-214ENST00000533595 OLFML1Q6UWY5 402 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 MMS22LQ6ZRQ5 1243 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 TOGARAM2Q6ZUX3 1019 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 FAM183BPQ6ZVS7 135 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 PIWIL1Q96J94 861 aaKnown RBP15.26■□□□□ 0.03
SF3B2-214ENST00000533595 ZFRQ96KR1 1074 aaKnown RBP15.26■□□□□ 0.03
SF3B2-214ENST00000533595 DNAJC7Q99615 494 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 KLF16Q9BXK1 252 aaPredicted RBP15.26■□□□□ 0.03
SF3B2-214ENST00000533595 SMOC2Q9H3U7 446 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 BRD9Q9H8M2 597 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 ASNSD1Q9NWL6 643 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 CFAP97Q9P2B7 532 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 RASAL2Q9UJF2 1139 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 STRIP2Q9ULQ0 834 aa15.26■□□□□ 0.03
SF3B2-214ENST00000533595 TNFRSF10AO00220 468 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 ZNF263O14978 683 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 CHADO15335 359 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 HSF2BPO75031 334 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 MFAP3LO75121 409 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 GLI1P08151 1106 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 NCAM1P13591 858 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 GPC5P78333 572 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 SLC6A3Q01959 620 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 GOLGA8FQ08AF8 430 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 GOLGA8DPQ0D2H9 430 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 ARID5BQ14865 1188 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 MTF1Q14872 753 aa15.25■□□□□ 0.03
SF3B2-214ENST00000533595 ARHGAP29Q52LW3 1261 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms