RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 TATDN1Q6P1N9 297 aa18.13■□□□□ 0.49
PHRF1-205ENST00000533464 IRF2BP1Q8IU81 584 aa18.13■□□□□ 0.49
PHRF1-205ENST00000533464 ARHGAP10A1A4S6 786 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 SHROOM1Q2M3G4 852 aaPredicted RBP18.12■□□□□ 0.49
PHRF1-205ENST00000533464 WNK4Q96J92 1243 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 NINJ2Q9NZG7 142 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 RUVBL2Q9Y230 463 aaKnown RBP18.12■□□□□ 0.49
PHRF1-205ENST00000533464 UNC45BQ8IWX7 931 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 SLC2A14Q8TDB8 520 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 FOPNLQ96NB1 174 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 TMEM134Q9H6X4 195 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 PRPF4O43172 522 aaKnown RBP eCLIP18.12■□□□□ 0.491e-6■■□□□ 11.8
PHRF1-205ENST00000533464 TBC1D12O60347 775 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 SGO1Q5FBB7 561 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 FAM71AQ8IYT1 594 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 SLC24A3Q9HC58 644 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 MRC1P22897 1456 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 TRPC5OSA6NMA1 111 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 E5RJQ4 531 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 RNF225M0QZC1 329 aaPredicted RBP18.12■□□□□ 0.49
PHRF1-205ENST00000533464 NQO1P15559 274 aaKnown RBP18.12■□□□□ 0.49
PHRF1-205ENST00000533464 BGNP21810 368 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 MPP3Q13368 585 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 ARSHQ5FYA8 562 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 RIOX2Q8IUF8 465 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 SUGP1Q8IWZ8 645 aaKnown RBP18.12■□□□□ 0.49
PHRF1-205ENST00000533464 PCSK9Q8NBP7 692 aaKnown RBP18.12■□□□□ 0.49
PHRF1-205ENST00000533464 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.12■□□□□ 0.49
PHRF1-205ENST00000533464 COPS5Q92905 334 aa18.12■□□□□ 0.49
PHRF1-205ENST00000533464 CFAP99D6REC4 459 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 NPM3O75607 178 aaKnown RBP18.11■□□□□ 0.49
PHRF1-205ENST00000533464 HMGCRP04035 888 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 LGALS2P05162 132 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 AMPD1P23109 780 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 AQP5P55064 265 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 CELF6Q96J87 481 aaKnown RBP18.11■□□□□ 0.49
PHRF1-205ENST00000533464 TGFB1I1O43294 461 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 NUDT2P50583 147 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 MTDHQ86UE4 582 aaKnown RBP18.11■□□□□ 0.49
PHRF1-205ENST00000533464 CEP19Q96LK0 163 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 ZNF446Q9NWS9 450 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 CRLS1Q9UJA2 301 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 SLC12A8A0AV02 714 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 PPP1R11O60927 126 aaPredicted RBP18.11■□□□□ 0.49
PHRF1-205ENST00000533464 UBOX5O94941 541 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 HNRNPH3P31942 346 aaKnown RBP18.11■□□□□ 0.49
PHRF1-205ENST00000533464 POU4F1Q01851 419 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 NFE2Q16621 373 aaPredicted RBP18.11■□□□□ 0.49
PHRF1-205ENST00000533464 OVOS1Q6IE37 1185 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 TLK2Q86UE8 772 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 GALNT4Q8N4A0 578 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 UBE2OQ9C0C9 1292 aaKnown RBP18.11■□□□□ 0.49
PHRF1-205ENST00000533464 DNAJC16Q9Y2G8 782 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 C2orf81A6NN90 581 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 ZNF410Q86VK4 478 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 ZDHHC17Q8IUH5 632 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 FAM136AQ96C01 138 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 FICDQ9BVA6 458 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 ARHGAP26Q9UNA1 814 aa18.11■□□□□ 0.49
PHRF1-205ENST00000533464 O00370 1275 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 IRF6O14896 467 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 NCAM2O15394 837 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 SOAT2O75908 522 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 RALBP11234 206 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 OCA2Q04671 838 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 MGAT5Q09328 741 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 DGKZQ13574 1117 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 NUDT18Q6ZVK8 323 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 YAF2Q8IY57 180 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 KATNAL2Q8IYT4 538 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 SHC3Q92529 594 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 RIC8BQ9NVN3 520 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 VPS9D1Q9Y2B5 631 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 SYNDIG1LA6NDD5 238 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 MAP2K7O14733 419 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 TM9SF1O15321 606 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 CNTFP26441 200 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 CSE1LP55060 971 aaKnown RBP18.1■□□□□ 0.49
PHRF1-205ENST00000533464 MFSD10Q14728 455 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 DEFB106AQ8N104 65 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 KAT2BQ92831 832 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 RNF19AQ9NV58 838 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 DDX20Q9UHI6 824 aaKnown RBP18.1■□□□□ 0.49
PHRF1-205ENST00000533464 VANGL2Q9ULK5 521 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 KIF1AQ12756 1690 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 CNTNAP2Q9UHC6 1331 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 ACVR2BQ13705 512 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 NT5DC4Q86YG4 428 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 HS6ST3Q8IZP7 471 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 RBM22Q9NW64 420 aaKnown RBP eCLIP18.1■□□□□ 0.495e-8■■■■■ 27.2
PHRF1-205ENST00000533464 PIH1D1Q9NWS0 290 aaKnown RBP18.1■□□□□ 0.49
PHRF1-205ENST00000533464 TRMT6Q9UJA5 497 aaKnown RBP18.1■□□□□ 0.49
PHRF1-205ENST00000533464 ACOT9Q9Y305 439 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 MYO5BQ9ULV0 1848 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 KCNK10P57789 538 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 RPL10AP62906 217 aaKnown RBP18.1■□□□□ 0.49
PHRF1-205ENST00000533464 SLC6A3Q01959 620 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 GTF2H3Q13889 308 aa18.1■□□□□ 0.49
PHRF1-205ENST00000533464 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.1■□□□□ 0.491e-6■■■□□ 18.6
PHRF1-205ENST00000533464 ADAM32Q8TC27 787 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms