RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 BBS7Q8IWZ6 715 aa24.7■■□□□ 1.54
SMPD1-209ENST00000533196 ARID3AQ99856 593 aa24.7■■□□□ 1.54
SMPD1-209ENST00000533196 SPHK2Q9NRA0 654 aa24.7■■□□□ 1.54
SMPD1-209ENST00000533196 A0A1W2PQH9 124 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 SCAMP3O14828 347 aaKnown RBP24.69■■□□□ 1.54
SMPD1-209ENST00000533196 KAT7O95251 611 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 RALAP11233 206 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 RARGP13631 454 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 HOXC13P31276 330 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 TNFRSF4P43489 277 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 PLA2G4AP47712 749 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 SLC6A11P48066 632 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 MORC3Q14149 939 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 ARHGAP18Q8N392 663 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 FAM160A2Q8N612 972 aaPredicted RBP24.69■■□□□ 1.54
SMPD1-209ENST00000533196 ANKRD52Q8NB46 1076 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 HHIPQ96QV1 700 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 NMUR1Q9HB89 426 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 ARHGEF4Q9NR80 690 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 OSER1Q9NX31 292 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 DNMT3LQ9UJW3 386 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 NAGPAQ9UK23 515 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 MMP17Q9ULZ9 603 aa24.69■■□□□ 1.54
SMPD1-209ENST00000533196 P4HA2O15460 535 aa24.68■■□□□ 1.54
SMPD1-209ENST00000533196 CCDC192P0DO97 292 aa24.68■■□□□ 1.54
SMPD1-209ENST00000533196 CD44P16070 742 aaKnown RBP24.68■■□□□ 1.54
SMPD1-209ENST00000533196 PXNP49023 591 aaPredicted RBP24.68■■□□□ 1.54
SMPD1-209ENST00000533196 FMO5P49326 533 aa24.68■■□□□ 1.54
SMPD1-209ENST00000533196 SPEM2Q0P670 501 aa24.68■■□□□ 1.54
SMPD1-209ENST00000533196 CETN1Q12798 172 aa24.68■■□□□ 1.54
SMPD1-209ENST00000533196 CCDC40Q4G0X9 1142 aa24.68■■□□□ 1.54
SMPD1-209ENST00000533196 RAB41Q5JT25 222 aa24.68■■□□□ 1.54
SMPD1-209ENST00000533196 NUDT18Q6ZVK8 323 aa24.68■■□□□ 1.54
SMPD1-209ENST00000533196 ETFBKMTQ8IXQ9 262 aa24.68■■□□□ 1.54
SMPD1-209ENST00000533196 TSTD1Q8NFU3 115 aa24.68■■□□□ 1.54
SMPD1-209ENST00000533196 PARD6AQ9NPB6 346 aa24.68■■□□□ 1.54
SMPD1-209ENST00000533196 KIAA1257Q9ULG3 409 aa24.68■■□□□ 1.54
SMPD1-209ENST00000533196 DCHS1Q96JQ0 3298 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 GREM1O60565 184 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 TBX18O95935 607 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 IRF1P10914 325 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 CSRP2Q16527 193 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 C2orf27AQ580R0 203 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 C10orf120Q5SQS8 335 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 ISM2Q6H9L7 571 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 TTI2Q6NXR4 508 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 PIGZQ86VD9 579 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 C12orf40Q86WS4 652 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 KCNV2Q8TDN2 545 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 ZC3H10Q96K80 434 aaKnown RBP24.67■■□□□ 1.54
SMPD1-209ENST00000533196 DEC1Q9P2X7 70 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 DMXL1Q9Y485 3027 aa24.67■■□□□ 1.54
SMPD1-209ENST00000533196 PPP1R3GB7ZBB8 358 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 GNA14O95837 355 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 SEC13P55735 322 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 RSPO4Q2I0M5 234 aaPredicted RBP24.66■■□□□ 1.54
SMPD1-209ENST00000533196 SGO2Q562F6 1265 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 SCD5Q86SK9 330 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 C11orf74Q86VG3 221 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 PHTF2Q8N3S3 785 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 NELFBQ8WX92 580 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 WBP2Q969T9 261 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 SEMA4GQ9NTN9 838 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 POLR3BQ9NW08 1133 aaPredicted RBP24.66■■□□□ 1.54
SMPD1-209ENST00000533196 MARK1Q9P0L2 795 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 WDR35Q9P2L0 1181 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 ZNF510Q9Y2H8 683 aa24.66■■□□□ 1.54
SMPD1-209ENST00000533196 GADD45BO75293 160 aaPredicted RBP24.65■■□□□ 1.54
SMPD1-209ENST00000533196 TULP3O75386 442 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 VDRP11473 427 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 BMP6P22004 513 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 DGKEP52429 567 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 CRY1Q16526 586 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 ANO4Q32M45 955 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 KLHL10Q6JEL2 608 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 DGLUCYQ7Z3D6 616 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 RASSF3Q86WH2 238 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 TMEM25Q86YD3 366 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 UBR7Q8N806 425 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 TRIML1Q8N9V2 468 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 CNOT6LQ96LI5 555 aaKnown RBP24.65■■□□□ 1.54
SMPD1-209ENST00000533196 NT5C1BQ96P26 610 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 XPO6Q96QU8 1125 aaKnown RBP24.65■■□□□ 1.54
SMPD1-209ENST00000533196 HESX1Q9UBX0 185 aa24.65■■□□□ 1.54
SMPD1-209ENST00000533196 XPO1O14980 1071 aaKnown RBP24.64■■□□□ 1.54
SMPD1-209ENST00000533196 EPN2O95208 641 aa24.64■■□□□ 1.54
SMPD1-209ENST00000533196 KIR2DL1P43626 348 aaPredicted RBP24.64■■□□□ 1.54
SMPD1-209ENST00000533196 BCAT1P54687 386 aa24.64■■□□□ 1.54
SMPD1-209ENST00000533196 COG7P83436 770 aa24.64■■□□□ 1.54
SMPD1-209ENST00000533196 EOGTQ5NDL2 527 aa24.64■■□□□ 1.54
SMPD1-209ENST00000533196 TSPAN16Q9UKR8 245 aa24.64■■□□□ 1.54
SMPD1-209ENST00000533196 PCDHGA5Q9Y5G8 931 aa24.64■■□□□ 1.54
SMPD1-209ENST00000533196 ALDH1A2O94788 518 aa24.63■■□□□ 1.53
SMPD1-209ENST00000533196 PAEPP09466 180 aa24.63■■□□□ 1.53
SMPD1-209ENST00000533196 CHRM1P11229 460 aaPredicted RBP24.63■■□□□ 1.53
SMPD1-209ENST00000533196 MARSP56192 900 aaKnown RBP24.63■■□□□ 1.53
SMPD1-209ENST00000533196 KDSRQ06136 332 aa24.63■■□□□ 1.53
SMPD1-209ENST00000533196 BST2Q10589 180 aaKnown RBP24.63■■□□□ 1.53
SMPD1-209ENST00000533196 PAK1Q13153 545 aa24.63■■□□□ 1.53
SMPD1-209ENST00000533196 PM20D1Q6GTS8 502 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms